Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5737g00005 ATGGCTCCTGTTGTTGATACTCCATTGGGCATTCTCAATGCTGCATTCTTCATCGCTATATTGATATGGATTTTGGTTGATAGTTTGAGGGAAAGTAGGCGTAGCGATGTTGTATATTTGAAACACGTACCGAAACGATTCGTTGTTTTCTCCACAATCACGCCTGTGTTTCATGTTATTCTTTCGGTTTTGAACTTCGCTTTTGCCTTTCATGAATATTGGAGGGAGAAAATCGTGTCATATTACTCTGTTTCGTTGGCTCTCACTTGGATTTTAGCGACCTTGGGTTCGGTGTACTCCATGAAGAGCATACGCCGAGAAAACAAAACGTGGCCTCTCGTTTTGATTCTCTGGTGGTTCTTCGCCACTGTGTTGGATTTAATCTTCGTTTCTGTGAAACTCTTCAAGAATTTCAAATCCTTGGATTTGTCTTTCTTTTTGTTAGAGGAAAACGTGGTGGATTTCGTTTCCTTTCCTCTTTTGTTACTTCTCTGGTTCAATGCTCTGCCTTCTGTATGGACGAGGAAACGCAGTGAATCTGAACAAGTGTTGCTTCAAAAGAAGGACGGCGGCGAAGAAGAAGAACAAGAAGATGAGGAAGCATTTATAAATGCTGGAATATGGAGCAAGCTCACGTTTCAATGGCTGAATCCTATTTTCAGGAGAGGTCAGATTCAGAAACTTGACCTTCCTCATATCCCTTCAGTACCTCAATCTGAAACTGCAGAATATGCTTCTTCCATGCTCGAAGATTCACTCCGAAAACGAAAACTCGAAAACGGCTCACTGACGAAAGCTATTGCTCATTCTATCTGGAAATCCTTGACCTTGAACGCAGTTTTCGCAGGTGTTAACACAGTGGCCTCTTACATGGGTCCCTTGTTGATCACAAATTTCGTGAATTTCTTATCGGGAAATTATAATGATTCAAGCATCCACTACGGGCTAATTCTTGCGTTCATTTTCTTCCTGGCAAAGACTCTGGAATCATTAACTCAAAGACAATGGTACTTTGGGGCTCAGCGAATAGGAATTCAAGTCCGTGCAGCTCTCACGGGTCTGATATACAACAAATCACTATCGATCAAGTGTGGTGGACCAACACATAGTAAAATCATAAACTTAATCAGTGTGGATGTTGAAAGGATTGGAGATTTCTGCTGGTTCATTCATGGAGTATGGTTGCTTCCAGTTCAGGTTGTGTTGGCCTTGGTTATCTTGTACAGGAATTTAGGATTCACACCCTCCGTTGCTGCATTTGCTGTCACTGTTTTGGTCATGGTGTGCAATACTCCCATGGCTAATATGCAGGAAAATCTTCACTCCAAGATTATGGAAGCCAAAGATTCGAGGATTAAAGCGACTTCAGAGATACTAAAGAACGTGAGAATTTTGAAATTGCATTCATGGGAGTCCACATTTCTGAAGAGGCTCCATCAGCTTAGGGAAATTGAGAAGAACTGGCTTAAGAAATATCTGTATACTTGCTCAGCAGTGACGTTTCTGTTTTGGACATCACCAACTCTTGTTTCTGTGGTCACTTTTGGTGTCTGTATAATGGTGAAAACAGAATTAACAGCAGCCACTGTACTCTCAGCTCTAGCAACTTTTCGTATCTTACAAGAACCAATCTACAACTTACCTGAGCTTGTCTCCATGATAGCTCAAACGAAAGTGTCACTTGATCGAATCCAAGAATTCATTAAAGAAGAGGATAAAATGCAATTCATGACTAAGCCTACATTGAAACCTTCTGATATTGCCATTGAAATTAAAACAGGCGAATACTCATGGGAAGCTGATGATCAATACTACAAGAAACCGACTATTCAAATTACAGAGAAGTTGAAAATAGAGAAAGGTCAAAAGGTAGCAATATGTGGGTCGGTGGGGTCTGGCAAATCAAGCCTGCTATGCTGTATGCTTGGTGAGATTCCGAGGATTTCAGGCCCAGGAATTGAAGTATATGGAAGTAGAAGTTATGTTCCCCAAAGTCCCTGGATTCAATCGGGGACTGTGAGAGAAAATATACTGTTTGGCAGGAAAATGAACAAGGACTTGTACGAGAATGTCCTGGAATGCTGTGCATTGCACCAGGATATCAATCACTGGGAAGATGGAGATTTGACCATGGTAGGGGAGAGGGGCATCAACTTAAGTGGAGGCCAAAAACAGAGAATTCAACTGGCAAGGGCTGTTTACAATGATTCTGATATTTATTTCCTGGATGACCCTTTCAGTGCCGTTGATGCTCATACTGGAACGCATTTGTTTAAGAAATGTCTCCTGAAACTCCTATCTGAGAAAACAGTTGTTTACGCTACCCATCAGCTGGAATTTTTGGAAGCTGCTGATCTTGTCTTGGTAATGAAAGATGGGAAAATAGCTGGGTCCGCAAAGTATGAAGACCTGATAGCATGCCACACTTGCGAACTTGTTGACCAAATGGCTGCTCATAAGGAAACAATCAAACAAATTAGACCGTGCTGCGAGTATAAATCCTTATCCAAGAACTGTACACCATGCCAAATACAGCAAATTAAAGTAGCCGAAACAAACCTTGAAGAAAACAGGACACAGTTGGAGAGAACCAAAGAAGAGAAAGCAGAGACGGGTCGAGTTGATTGGAGTGTTTACTCAACCTTCGTCACGTTTGCTTATAAAGGCGCATTTGTTCCTATTATTCTCTTATGCCAAATTCTCTTTCAAGGAATGCAAATTGGAAGCAATTATTGGATTGCTTGGGCGGCAGCACAAAGAGGCAGTGTTAGTAAAGAAATGCTTATAGGGACCTTTGTTTTGCTATCTGGTGGCAGTTCCATCTTCATACTAGGAAGGGCTATTTTCATGGCAAAAATTGCTGTAGAGACAGCTCAACGTCTTTACCAACAAATGATTACATCGGTTTTCAGAGCTCCCGTTTCTTTTTTCGATACCACCCCGTCAAGCAGAATCTTGAATAGGTGTTCCACAGATCAAAGTACAGTGGACACAGATATACCGTACCGATTAGCAGGACTAGTATTTGCACTTATCCAGTTGTTGAGTATCATCGTCCTGATGTCCCAGGTTGCTTGGCAAGTCATTCTTTTCTTTCTTGTCGTGCTTGCGATCTCCATCTGGTATCAGGCTTATTACATTACTACTGCCAGAGAATTGGCCAGGATGGTAGGAATAAGGAAGGCTCCAATCTTGCATCACTTCTCAGAATCAATTGCTGGGGTGGCCACAATCCGTTGTTTCAATCAACAGAAAAGATTTTATGGGAAAGTTATGGCTCTAATTGATGATTATTCTCGTGTGGCATTTCATAATTATGCCACCATGGAATGGTTATCTATTAGAATAAACTTTCTCTTTAATCTGGTCTTCTTCTTCGTTCTCATCATCTTGGTTACACTGCCAAGGTCTGCCATTGATCCCAGCTTGGCAGGTCTGGTAGCTACTTATGGTTTGAACTTGAGTGTTCTTCAGGCTTGGGTGATATGGAACCTCTGCAATGTGGAAAACAAAATGATATCAGTGGAGAGAATACTACAATTCACTAAGATACCAAGTGAAGCTCCATTGATAATTCAAGATTGTAGACCCCAAATAGAGTGGCCTACGGAGGGAAAAATTGAACTTCACAATCTCCATATTCAGTATGATCCTGCAGCTCCTATGGTTCTCAAAGGTGTCACTTGCACCTTTCCAGGACACAAGAAGATTGGAGTTGTAGGGAGGACAGGAAGTGGAAAATCCACCTTAGTGCAAGCTCTCTTCCGTGTGGTGGAACCTTCAGTAGGGTGGATACTTATTGATAGTGTGGATATTTGCAAGATTGGGCTAAAGGATTTGAGATCCAGGCTTGGCATAATTCCTCAGGATCCTACCTTGTTTCAAGGTACTGTAAGGAACAACTTGGATCCTCTAGAGCAACACTCAGATCAAGAACTTTGGGAGGTTCTCCGTAAGTGCCATCTTGCTGATATAGTTAGGAAGGACCCAAGGCTTCTTGATGCATCAGTGGCTGAAAATGGAGAGAATTGGAGTGTTGGACAAAGGCAACTTGTTTGTCTTGCCAGGCTGCTATTGAAGAAAAGAAGAATTTTGGTTCTTGATGAAGCTACTGCATCGATTGACACGGCGACTGATAATTTAATTCAAAAGACTATCAGAGAAGAGACAAGTGAATGCACGGTCATTACAGTAGCACATAGGATTCCTACAGTTATTGATAATGACCTCGTATTGGTTCTCGATGAAGGGAGGATTGCAGAGTTTGATCACCCAGCTAAGCTGCTAGAGAACAATTCATCATCATTCTCAAAGCTAGTATCAGAATTTTTGAGGAGATCAACTCAGAATGATTGCCAAAATGACACTATGTGA 4374 0.4166 MAPVVDTPLGILNAAFFIAILIWILVDSLRESRRSDVVYLKHVPKRFVVFSTITPVFHVILSVLNFAFAFHEYWREKIVSYYSVSLALTWILATLGSVYSMKSIRRENKTWPLVLILWWFFATVLDLIFVSVKLFKNFKSLDLSFFLLEENVVDFVSFPLLLLLWFNALPSVWTRKRSESEQVLLQKKDGGEEEEQEDEEAFINAGIWSKLTFQWLNPIFRRGQIQKLDLPHIPSVPQSETAEYASSMLEDSLRKRKLENGSLTKAIAHSIWKSLTLNAVFAGVNTVASYMGPLLITNFVNFLSGNYNDSSIHYGLILAFIFFLAKTLESLTQRQWYFGAQRIGIQVRAALTGLIYNKSLSIKCGGPTHSKIINLISVDVERIGDFCWFIHGVWLLPVQVVLALVILYRNLGFTPSVAAFAVTVLVMVCNTPMANMQENLHSKIMEAKDSRIKATSEILKNVRILKLHSWESTFLKRLHQLREIEKNWLKKYLYTCSAVTFLFWTSPTLVSVVTFGVCIMVKTELTAATVLSALATFRILQEPIYNLPELVSMIAQTKVSLDRIQEFIKEEDKMQFMTKPTLKPSDIAIEIKTGEYSWEADDQYYKKPTIQITEKLKIEKGQKVAICGSVGSGKSSLLCCMLGEIPRISGPGIEVYGSRSYVPQSPWIQSGTVRENILFGRKMNKDLYENVLECCALHQDINHWEDGDLTMVGERGINLSGGQKQRIQLARAVYNDSDIYFLDDPFSAVDAHTGTHLFKKCLLKLLSEKTVVYATHQLEFLEAADLVLVMKDGKIAGSAKYEDLIACHTCELVDQMAAHKETIKQIRPCCEYKSLSKNCTPCQIQQIKVAETNLEENRTQLERTKEEKAETGRVDWSVYSTFVTFAYKGAFVPIILLCQILFQGMQIGSNYWIAWAAAQRGSVSKEMLIGTFVLLSGGSSIFILGRAIFMAKIAVETAQRLYQQMITSVFRAPVSFFDTTPSSRILNRCSTDQSTVDTDIPYRLAGLVFALIQLLSIIVLMSQVAWQVILFFLVVLAISIWYQAYYITTARELARMVGIRKAPILHHFSESIAGVATIRCFNQQKRFYGKVMALIDDYSRVAFHNYATMEWLSIRINFLFNLVFFFVLIILVTLPRSAIDPSLAGLVATYGLNLSVLQAWVIWNLCNVENKMISVERILQFTKIPSEAPLIIQDCRPQIEWPTEGKIELHNLHIQYDPAAPMVLKGVTCTFPGHKKIGVVGRTGSGKSTLVQALFRVVEPSVGWILIDSVDICKIGLKDLRSRLGIIPQDPTLFQGTVRNNLDPLEQHSDQELWEVLRKCHLADIVRKDPRLLDASVAENGENWSVGQRQLVCLARLLLKKRRILVLDEATASIDTATDNLIQKTIREETSECTVITVAHRIPTVIDNDLVLVLDEGRIAEFDHPAKLLENNSSSFSKLVSEFLRRSTQNDCQNDTM 1457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5737g00005 1457 Gene3D ABC transporter type 1, transmembrane domain 263 566 IPR036640 GO:0005524|GO:0016020
Pral5737g00005 1457 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 614 807 IPR027417 -
Pral5737g00005 1457 FunFam ABC transporter C family member 5 855 1188 - -
Pral5737g00005 1457 ProSitePatterns ABC transporters family signature. 719 733 IPR017871 GO:0005524|GO:0016887
Pral5737g00005 1457 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 204 1445 - -
Pral5737g00005 1457 FunFam ABC transporter C family member 10 259 572 - -
Pral5737g00005 1457 FunFam Multidrug resistance-associated protein 4 575 834 - -
Pral5737g00005 1457 Pfam ABC transporter 1224 1372 IPR003439 GO:0005524
Pral5737g00005 1457 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 279 556 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pral5737g00005 1457 Gene3D ABC transporter type 1, transmembrane domain 855 1188 IPR036640 GO:0005524|GO:0016020
Pral5737g00005 1457 FunFam ABC transporter C family member 3 1190 1442 - -
Pral5737g00005 1457 CDD ABCC_MRP_domain1 589 794 - -
Pral5737g00005 1457 CDD ABC_6TM_ABCC_D1 277 564 IPR044746 GO:0140359
Pral5737g00005 1457 SUPERFAMILY ABC transporter transmembrane region 894 1189 IPR036640 GO:0005524|GO:0016020
Pral5737g00005 1457 Coils Coil 844 871 - -
Pral5737g00005 1457 CDD ABCC_MRP_domain2 1205 1425 - -
Pral5737g00005 1457 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1207 1441 IPR003439 GO:0005524
Pral5737g00005 1457 SMART AAA_5 620 794 IPR003593 GO:0016887
Pral5737g00005 1457 SMART AAA_5 1233 1420 IPR003593 GO:0016887
Pral5737g00005 1457 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 591 817 IPR003439 GO:0005524
Pral5737g00005 1457 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 894 1170 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pral5737g00005 1457 SUPERFAMILY ABC transporter transmembrane region 269 572 IPR036640 GO:0005524|GO:0016020
Pral5737g00005 1457 Gene3D - 1190 1443 IPR027417 -
Pral5737g00005 1457 CDD ABC_6TM_ABCC_D2 892 1182 IPR044726 GO:0140359
Pral5737g00005 1457 Gene3D - 567 830 IPR027417 -
Pral5737g00005 1457 Pfam ABC transporter transmembrane region 276 543 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pral5737g00005 1457 Pfam ABC transporter transmembrane region 911 1134 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pral5737g00005 1457 Pfam ABC transporter 615 746 IPR003439 GO:0005524
Pral5737g00005 1457 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1198 1433 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5737g00005 Pral-Chr5737 80877 86910 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5737g00005 579 844 Calmodulin-binding Proteins AT2G36910 28.179 1.07e-21 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5737g00005 - - mtr:25501707 2116.66