Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5733g00003 ATGGCTACTGAGGACTTCCCTCTCCTCGATTCCCCCTCCCACAACCCCCACTCGCAACCTCTCCTCCCGGCTCACACGCGCCACTTCCCTTCCTCCTCTAGCCCTACCACCGGCGTTGCACCTACCTCCGCCGATGCCGGTAACTCCTCCAACGCCGACTACTTCACTCAACCCTTCCCCGACGATGGCGAAGAGTCCTCTGATCCGAACAAATCCGCGTCTGGAGGTGTGACCCCTACTTCGAAGCGTACCGCCGTCGACAGCTCCTATTACTATAACAAGAAATTGAAATCCTCCGCCGCCGGTGGCGGAGGCAGCGTTGCTACGAGCGCTGAGCCTGATTTAGGATCCGAAGCGACTTACAGGGTCGATTACCGGAAGGATCGCGAGGAATGGAGCGACACGGCGATTGAGTGTCTCCTGGACGCTTACGCAGAGAAACTGAACCAACTGAATCGAGGAAATCTGCGCGGGCGCGATTGGGAGGATGTGGCGAGAGCAGTCAGCGAGCGTTGCTCTGTTGGTGGCGGTGTCGATGGAAAGAGCAAATCGTATAAAAGTGTGGAGCAATGCAAGAACAAGATTGATAATTTGAAGAAGAGGTACAAAGTGGAGCTTCAGAGGATAAGCAGTGGCGGCATCTCATCGAGTAACTGGCACTGGTTTAAAAAGATTGAAGCTATCGTTGGGAGCTCATTGCCTGTGAAGACGGTTTCCGATGATGAGAAGGGTGGTGGAGCTAATTCCTTGCCCGTGGCGAGACGCCCAAAGAACAGATATACGCCTACCAACGTTGCAGTGTTGAATAACCCGAAAACAAAACCAGCATCTAATCTCAAATGGCATAGAGTTCTGTTTAAAATCAGTGGATCTGCGTTGGCTGGAAACTGCCAAAGTATTGACCCCAAGGTGGCAATGCAGATTGCTGGGGAAGTGGCGACAGCTTGCCGCCTTGGTGTAGAGGTTGCCATTGTCGTTGGTGGTCGTAACTTCTTTTGTGGAGATTCCTGGGTGTCTGCTACTGGGTTGGACAGACCTACGGCCTACCAAATTGGTATGATGGCTACGGTTATGAATTCTATTCTGCTTCACTCTGCTTTGGAGAAGCTGGGTATTCAGGCACGCATTCAAAGTGCATTCTCTGTGCCAGAGATTGCTGAACCTTATAGCAGACAACGGGCTATCCGACATCTCGAGAAAGGAAGGGTCGTCATATTGGGTGGTGTTGGTGCCGCCACTGGAAATCCTCTCTTTACCACTGATACAGCTGCAGCTCTGAGAGCTTCCGAGCTTAGTGCAGATGTTATGCTGAAAGGAACCAATGCTAGTGGGGCCTATGATTGCCATACTGGCAGTGAGAATGTTACACTTGATCACATTTCTTTTCGAGAAGTTGCTTCGAGGGGCATCACTTCCATAGATATGATGACGTTAGCATGCTGTGAAGAGAATGGAATTCCAGTTGTAGTCTTCAACATGCTTGAACCGGGAAATGTTTCAAGAGCACTATGTGGAGATCAAATTGGCACTTTGATTGATCAAACAGGAAGTATTAATTAA 1560 0.5045 MATEDFPLLDSPSHNPHSQPLLPAHTRHFPSSSSPTTGVAPTSADAGNSSNADYFTQPFPDDGEESSDPNKSASGGVTPTSKRTAVDSSYYYNKKLKSSAAGGGGSVATSAEPDLGSEATYRVDYRKDREEWSDTAIECLLDAYAEKLNQLNRGNLRGRDWEDVARAVSERCSVGGGVDGKSKSYKSVEQCKNKIDNLKKRYKVELQRISSGGISSSNWHWFKKIEAIVGSSLPVKTVSDDEKGGGANSLPVARRPKNRYTPTNVAVLNNPKTKPASNLKWHRVLFKISGSALAGNCQSIDPKVAMQIAGEVATACRLGVEVAIVVGGRNFFCGDSWVSATGLDRPTAYQIGMMATVMNSILLHSALEKLGIQARIQSAFSVPEIAEPYSRQRAIRHLEKGRVVILGGVGAATGNPLFTTDTAAALRASELSADVMLKGTNASGAYDCHTGSENVTLDHISFREVASRGITSIDMMTLACCEENGIPVVVFNMLEPGNVSRALCGDQIGTLIDQTGSIN 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5733g00003 519 Pfam Myb/SANT-like DNA-binding domain 129 228 IPR044822 -
Pral5733g00003 519 MobiDBLite consensus disorder prediction 1 84 - -
Pral5733g00003 519 SUPERFAMILY Carbamate kinase-like 280 512 IPR036393 -
Pral5733g00003 519 CDD AAK_UMPK-PyrH-Ec 283 513 IPR015963 GO:0005737|GO:0006221|GO:0033862
Pral5733g00003 519 FunFam Uridylate kinase isoform A 273 518 - -
Pral5733g00003 519 MobiDBLite consensus disorder prediction 12 56 - -
Pral5733g00003 519 Pfam Amino acid kinase family 283 492 IPR001048 -
Pral5733g00003 519 MobiDBLite consensus disorder prediction 69 84 - -
Pral5733g00003 519 Coils Coil 188 208 - -
Pral5733g00003 519 Hamap Uridylate kinase [pyrH]. 279 513 IPR015963 GO:0005737|GO:0006221|GO:0033862
Pral5733g00003 519 Gene3D - 132 204 - -
Pral5733g00003 519 Gene3D - 272 518 IPR036393 -
Pral5733g00003 519 PANTHER URIDYLATE KINASE 125 518 - -
Pral5733g00003 519 FunFam Aspartate/glutamate/uridylate kinase family protein 132 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5733g00003 Pral-Chr5733 19156 22425 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5733g00003 132 252 Trihelix Transcription Factor Family AT3G14180 38.211 2.77e-18 85.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pral5733g00003 AA_kinase 1.4e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5733g00003 - - qsa:O6P43_004948 795.808