Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5733g00002 ATGGCCGCGCCGAAGCCACGCAACACTCGATCAACGTCTCTCAGGGACGCCTCTGACTCCTCCAAGATGGAGGGCACGGGTACATGGGATGCCCTCCAATGGACCAAGTTTCAGCCTGGTTCACGCAACGTTTCGCATGCCAATTTAGATTTCTTGCTGGAGGAAGAAAACATCATAGCCCAGGGACATGGCGTTGTTCTTATTAATTCAGATGATGCAGGCACATTGGTGGTCACAAATTTTCGTCTTGTTTTTCTGAGTGATCGAACTAGAAATATTATTGCCCTTGGAACGATTGCACTTGCAACAATTGAGAAGTTTAACAAGATAGCTGTAAAGATGCAGTCAGCCAATCGTCAATTAGACAAGACACCCCCACAAAGACTGCTCCAGGTTATTGGAAAAGATATGAGAATTATCGTTTTTGGTTTCAGGCCTCGTACAAAGCAGAGGCGTGTCATATTTGATGCCTTACTAAGAAGTACAAAGCCAGCTGTACTATGGGATCTTTATGCATTTATATGTGGACCTTCTAAGTTTACTAACTCTAACCCAAAGGTGCGCCTACTAGATGAGTATTTCCGGCTTCTTGGAAAACGCTTTTACCGTGCTTCAAGCAATATGATTGAAAGTGGATCCTTTACCTTGTCAAATGACTTGTGGAGAATAAGTAAAGTGAACTCTAACTACAACGTGTGCCAGAGTTATCCTTTCGCTTTGATTGTACCAAAGACCATAAGTGATGATGAAGTGCAACAAGCTTCCAGCTTTCGTGGTAGATGTCGGGTTCCTGTAGTTTCATGGTGCCACCCAGGTATACTGACAACTTATAGATACGGAGCGGTTCTTGCACGTTCATCCCAACCTTTAGTTGGCCTCATGATGAATATGAGGAGCAATGCAGATGAAAAGCTCGTCGCTGGATTATGTGGCAAACTTTATGATGGCTCGCGCAGGAAGCTTTATATTGCTGATGCAAGACCGAGGAAAAATGCATTAGCTAATGGGGCCATGGGAGGTGGTTCGGAATCATCTTCAAATTACTTTCAGTGTGAGGTCTGTAGTTTTTTTGGTATAGACAACATCCATGCAATGAGAGAAAGCTTTGCTCGGCTAAGAGAATACCTAGACACTCATGGCAAATCATCATCAGATGGAATGTCATCTTTCTTGAGACATGGTGGGTCAACATGGGGTGGAGGCAATCTAAGTAGTATGTCTACTTCAGTATCTACTCTTGGGGACAGTGGATGGCTACTACACGTTCAAAGTGTCTTAGCTGGTGCTGCTTGGATTGCTGCTCGCCTTCATATGGAAAAGGCTTCTGTTCTTGTACATTGCAGTGATGGCTGGGATAGAACAAGTCAATTGGTTTCTCTTGCTGATTTGTTACTTGATCCCTTCTATCGCACATTCACAGGGTTTCAGGCACTTGTTGAAAAAGACTGGCTAGCATTTGGTCACCCATTTTCAGATCGTATGGGAACGCCCTCAGTCTCTGGAAGTGGCAGCATGCCTTTTGAGTTGACTAGACAGTCTTCTACTGGAACTTGCCCTTCACCACCCATGCGCCAGTCATCATTCACATCTCAGTCATCCGCCTCTCATGCACAGACTTCAAACCACTACTCTCCCATTTTTTTGCAGTGGGTTGATTGTGTTTCGCAACTATTGCGGATGTATCCTTTTGCTTTTGAGTTCTCCTCGGTTTTCCTGGTGGACTTCCTGGACTGTGTTCTTTCTTGTCGATTTGGAAACTTCTTATGTAATAGTGAGAAGGAAAGGCAGCAATGCAATGTTTTTGAAGCGTGTGGATGTTTGTGGGCATTCTTGGCTGACTTGCGTGCTTCTGAAGGAAAATCTCATGTGCATTATAATCTCTATTATGATCCATTGAAGTACAACGGTCCTATCTTGCCCCCAGCAGCAGCTTTAGCCCCAACACTCTGGCCCCAATTTCTTCTTCGCTGGGCTTGTCCGGAAGAAGCGCAAGCTGCTGCTGAAATTGAAGCAGAATGTAGACAAATGTTTCTGAAATACTCTGACATGCAAAAGGCTAAAGAATTGGCGGAGATGAAATCCAAAGAAATTGAAATTGCCATGGAATCATTGAGTTCAGAATTACGAAATGAGAAACAGTTAAGATGGTCAGCTATGAACATGACCAAGAAAACAAGCAAAGAGAATGTGGCCATAAAACGAGCCATTCAGTCATTGGGGTGCAAGTTTCACTTATCTGACAATGGAGATTGTGTCTTTGATATTGAAAGCAACTTAGTGGGATCAGCACAAACCACTATGTACCCTTCCACGAAAAAGGACTTGGATAGCACTTCACATGACGACAAGAAGGATCTGTCTGTTTCAGTAGCAGTCACGGAGGGTGATGATCATGACGATCATGCAAGCAATGCATTTGTTCAAGTATGTGAAGCGCTATGCCCACTTCGTACTCCAAGTCGACGCTGCAGGTGGCCAAATGCTGGTTGTGCGCGGCTAAGTAGCCAGCTTGTTGGTTTAAGAGCAAATTTTGATGCATTTGATCATTTGTCGATTGATGATAGTTATTTTAAATCTGAATGA 2583 0.439 MAAPKPRNTRSTSLRDASDSSKMEGTGTWDALQWTKFQPGSRNVSHANLDFLLEEENIIAQGHGVVLINSDDAGTLVVTNFRLVFLSDRTRNIIALGTIALATIEKFNKIAVKMQSANRQLDKTPPQRLLQVIGKDMRIIVFGFRPRTKQRRVIFDALLRSTKPAVLWDLYAFICGPSKFTNSNPKVRLLDEYFRLLGKRFYRASSNMIESGSFTLSNDLWRISKVNSNYNVCQSYPFALIVPKTISDDEVQQASSFRGRCRVPVVSWCHPGILTTYRYGAVLARSSQPLVGLMMNMRSNADEKLVAGLCGKLYDGSRRKLYIADARPRKNALANGAMGGGSESSSNYFQCEVCSFFGIDNIHAMRESFARLREYLDTHGKSSSDGMSSFLRHGGSTWGGGNLSSMSTSVSTLGDSGWLLHVQSVLAGAAWIAARLHMEKASVLVHCSDGWDRTSQLVSLADLLLDPFYRTFTGFQALVEKDWLAFGHPFSDRMGTPSVSGSGSMPFELTRQSSTGTCPSPPMRQSSFTSQSSASHAQTSNHYSPIFLQWVDCVSQLLRMYPFAFEFSSVFLVDFLDCVLSCRFGNFLCNSEKERQQCNVFEACGCLWAFLADLRASEGKSHVHYNLYYDPLKYNGPILPPAAALAPTLWPQFLLRWACPEEAQAAAEIEAECRQMFLKYSDMQKAKELAEMKSKEIEIAMESLSSELRNEKQLRWSAMNMTKKTSKENVAIKRAIQSLGCKFHLSDNGDCVFDIESNLVGSAQTTMYPSTKKDLDSTSHDDKKDLSVSVAVTEGDDHDDHASNAFVQVCEALCPLRTPSRRCRWPNAGCARLSSQLVGLRANFDAFDHLSIDDSYFKSE 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5733g00002 860 Pfam Myotubularin-like phosphatase domain 171 596 IPR010569 -
Pral5733g00002 860 Coils Coil 687 714 - -
Pral5733g00002 860 Gene3D - 63 162 IPR011993 -
Pral5733g00002 860 SUPERFAMILY PH domain-like 52 175 - -
Pral5733g00002 860 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 213 658 IPR029021 -
Pral5733g00002 860 ProSiteProfiles Myotubularin phosphatase domain. 198 654 IPR010569 -
Pral5733g00002 860 ProSitePatterns Tyrosine specific protein phosphatases active site. 445 455 IPR016130 GO:0016311|GO:0016791
Pral5733g00002 860 MobiDBLite consensus disorder prediction 510 531 - -
Pral5733g00002 860 CDD PTP-MTM-like 261 556 - -
Pral5733g00002 860 MobiDBLite consensus disorder prediction 1 25 - -
Pral5733g00002 860 PANTHER MYOTUBULARIN-RELATED 43 828 IPR030564 -
Pral5733g00002 860 SMART gram2001c 49 111 IPR004182 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5733g00002 Pral-Chr5733 4073 18399 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5733g00002 1 858 Protein tyrosine phosphatase (PTP) family AT3G10550 64.460 0.0 1125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5733g00002 K18081 - gmx:100781842 1255.74