Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5730g00004 ATGTTGGCTATGGAGAAGGATTTTGATTCTAAGTTGAGGATTCAGGAGAATTCGTCTGCTGATGGCAATGTGCAGAGATCTAAGAGCTTTGCCTTCAGAGCCCCTCAGGAGAATTTCACCATACAGGACTTTGAATTGGGAAAGATCTATGGTGTTGGCTCTTATTCTAAGGTTGTGAGGGCAAAGAAGAAGGACACAGGAGTTGTGTATGCATTGAAAATCATGGATAAAAAATTTATTACTAAAGAGAATAAAACAGCTTATGTGAAGTTGGAGCGCATAGTGCTTGATCAATTGGACCATCCTGGCATTGTGCGCCTATTTTTCACATTTCAAGACACATTTTCCATTTACATGGCACTTGAGTCCTGTGAAGGTGGAGAACTTTTTGATCAAATAACCCGGAAAGGTCGTCTATCCGAGGATGAAGCACGGTTCTATGCAGCTGAAGTTGTGGATGCCCTTGAATATATACATAGTTTGGGATTGATACATCGTGATATTAAGCCAGAGAACTTGTTACTTACGGCTGAAGGACATATTAAAATCGCTGATTTTGGGAGTGTGAAGCCTATGCAGGACAGCCGCATTACAGTCCTTCCAAATGCAGCAGCATCAGATGATAAAGCCTGCACATTTGTGGGGACAGCTGCTTATGTCCCTCCAGAGGTTCTTAATTCTTCTCCAGCAACTTTTGGAAATGACCTCTGGGCTCTCGGTTGCACATTATATCAAATGCTTTCTGGAACTTCTCCATTTAAAGATGCTAGTGAATGGCTTATTTTCCAAAGAATTATAGCCAGAGATCTTCGATTTCCAGATTACTTTTCTGAGCAAGCAATTGACCTCATTGACCGTTTACTGGATTTAAATCCAATGAGGAGACCAGGTGCTGGACCTGATGGATATGGAGTTCTCAAAATGCATCCTTTTTTCAAGGGAGTAAACTGGAAAAACATAAGGGACCAAAGCCCCCCAAAACTTGCTCCAGAAGCAGGGGATGGTTCTACTAAACCTGATGGAAATACCAGTGCTGCTACTTCTGATGGGACTGCTCATGTGACCAGGCTAGCTTCAATTGATTCTTTCGATTCAAAATGGCAACAATTTTTGGAACCTGGGGAAACTGTTCTTATGATCTCAAATGTGAAGAAATTACAGAAACTAACAAGCAAGAAGGTGCAGCTCATCCTTACAAACAAGCCAAAGTTGATCTACGTTGACCCATCAAAACTGATTGTAAAGGGAAATATGTTATGGTCTGATAATCCAAGTGAACTTTCAGTCCAAGTGACTAGTCCTTCACATTTTAAGCCAAAGAAAGTAATGTCATTGGAGGATGCAAAACAAAGAGCATGGCAGTGGAAGAAGGCAATTGAAGGGCTTCAAAACCGATGA 1398 0.4134 MLAMEKDFDSKLRIQENSSADGNVQRSKSFAFRAPQENFTIQDFELGKIYGVGSYSKVVRAKKKDTGVVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGIVRLFFTFQDTFSIYMALESCEGGELFDQITRKGRLSEDEARFYAAEVVDALEYIHSLGLIHRDIKPENLLLTAEGHIKIADFGSVKPMQDSRITVLPNAAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDASEWLIFQRIIARDLRFPDYFSEQAIDLIDRLLDLNPMRRPGAGPDGYGVLKMHPFFKGVNWKNIRDQSPPKLAPEAGDGSTKPDGNTSAATSDGTAHVTRLASIDSFDSKWQQFLEPGETVLMISNVKKLQKLTSKKVQLILTNKPKLIYVDPSKLIVKGNMLWSDNPSELSVQVTSPSHFKPKKVMSLEDAKQRAWQWKKAIEGLQNR 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5730g00004 465 Gene3D Phosphorylase Kinase; domain 1 42 127 - -
Pral5730g00004 465 ProSiteProfiles Protein kinase domain profile. 44 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5730g00004 465 Coils Coil 445 465 - -
Pral5730g00004 465 SMART serkin_6 44 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5730g00004 465 SUPERFAMILY PH domain-like 306 464 - -
Pral5730g00004 465 FunFam 3-phosphoinositide-dependent protein kinase 2-like 42 127 - -
Pral5730g00004 465 CDD STKc_PDK1 42 312 IPR039046 GO:0004674
Pral5730g00004 465 Pfam PH domain 365 464 IPR033931 -
Pral5730g00004 465 Pfam Protein kinase domain 46 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5730g00004 465 Gene3D - 340 465 IPR011993 -
Pral5730g00004 465 SUPERFAMILY Protein kinase-like (PK-like) 28 327 IPR011009 -
Pral5730g00004 465 ProSitePatterns Serine/Threonine protein kinases active-site signature. 163 175 IPR008271 GO:0004672|GO:0006468
Pral5730g00004 465 Gene3D Transferase(Phosphotransferase) domain 1 128 331 - -
Pral5730g00004 465 PANTHER SERINE/THREONINE-PROTEIN KINASE 27 340 - -
Pral5730g00004 465 FunFam 3-phosphoinositide-dependent protein kinase 1 339 465 - -
Pral5730g00004 465 MobiDBLite consensus disorder prediction 323 350 - -
Pral5730g00004 465 FunFam 3-phosphoinositide-dependent protein kinase 2-like 128 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5730g00004 Pral-Chr5730 29874 36510 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5730g00004 1 465 AGC Kinase Gene Family AT3G10540 79.261 0.0 786
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_PDK1 Pral5730g00004 Pkinase 2.7e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5730g00004 K06276 - cave:132164552 818.15