Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5728g00004 ATGGCCAAAAAGGGTGCTTACAGTTTGAAGAAGCTTCTTAGTAACCAATATGGCAGGCAGACAGAATTAAATGCAGAGCAGACCATTTCTGCAGTTGATCTCTCTGCAAAAACAATGTCATCATCAGGAGAGGAATTTGCTTGGTCTGCCATTGAAGAAGAGTCAAGCAAATCTCTTGCTTCATTTGATGAAAGGAGTGGCTATGATTCACGGAGTGGGATATATCACTCTCTTGTTAAGCTTAGTGCTAAGAATGAAATCCCCACAAGGCCTGATATTGACGCTGCAACTCTAGTCCTATCACACTTCCCTCGTGCACACCAGCTTGCTGCTAAAAAGCCTGCCTTCGTTGATGCCTCTACTAACCAAACTATAAGCTATGGTGAACTTCAAAGCTCTGTTTACTCCCTTGCTTCGGGTTTATACCATGGCATTGGGATCCGAAAAGGCTATGTGGTGTTTGTTCTGTCACCAAATTCAATTTTGTACCCAACTATATGCCTTGCTGTGTTATCAATAGGAGCTATCCTTACCACAGCAAATCCTCTTAACACAGCATCAGAAATAGCCAAGCAAGTAAAAGATTCAGGTGCCAAACTGGCCATTTCAGCACCTGAGATGATGAAGAAACTTTTACCAACTGGGGTTCCTATAATTCTCACCACTCGTCAATCTGATGGCCGAATGTTGTCAGTTGAAGAGTTAATAGAAGGCTGCTCTGATAATATTCCAGAACAGCTGCCCCAAGTTAAATTGGCTCAATCAGACACTGCAGCTATATTGTACTCTTCAGGCACCACTGGGATGAGCAAAGGTGTGGTTTTGACACATGCTAATATCATATCCATCGTAAGTTTACTGACTTGGTCTGCAGATGTAACTTCATCCCAGAATGATGTTTTTCTGGGATTCATCCCAATATTTCACATTTATGGGTTGGTGTTCTTTGGATTGGGACTGTTGTGTAGGGGTGTTACATCAGTTATAATGCAGAAATTTGACTTCAAAGAAATGCTTTTTGCAATTCAAAAGTACAGAGTCAATAACTTACCAGCAGTGCCTCCTGTGATTCTTGCTCTTGTGAAATATGGAGGCAAAGCTCGGTTTGACTTGTCGAGCCTCAAAAAAGTGGGTTCAGGCGCTGCACCTCTGAGTAAGGAACTAACTGAGGAATTTAGAAAGATGTTTCCTTGGGTTGAGCTAAGGCAAGGCTATGGACTAACAGAAAGTTGTGGTGGAGCAACATTTTTTGTGTCTGATAAAGACGCTAAAGCTCGGCCTGGCTCGTGTGGGAGGCTACTTCCAACTTTCTGCGCAAAAATAGTGGATGTTGAAACAGGGAAGCCTTTGCCTCCTGGAAAGGAAGGAGAGTTGTGGCTTAAAAGCCCTGCAATAATGAAAGAATATCTGGGAAATATGGAAGCAACGGCTTCTACACTTGATTCAGAAGGGTGGTTGAAGACAGGCGACCTTGCTTATGTTGACGAGGATGGATTTGTCTATGTCCTTGAACGAATAAAGGAGCTGATCAAACACAACGGGTATCAGGTTGCTCCTGCAGAACTGGAAGCTCTGCTGCTTAGCCATCCCAATATTGTTGATGCAGCTGTTATACCGGTTGAAGATGTAGAAACTGGACAGATACCAATGGCGTATGTGGTGAAAGCAGCTGGTTCTGAGATCACAGAAGACCAAGTCATTCAATTTGCCGCCAGCCAGGTGGCTCCATATAAGAAAATAAGAAAGGTGAGCTTCATTGATGCTATTCCAAGGTCAGCTGCAGGTAAAATCTTGCGCAAGGATCTTGTTTCACACAGCAAAATGAAACGCGTTTCCAAGTTATGA 1845 0.432 MAKKGAYSLKKLLSNQYGRQTELNAEQTISAVDLSAKTMSSSGEEFAWSAIEEESSKSLASFDERSGYDSRSGIYHSLVKLSAKNEIPTRPDIDAATLVLSHFPRAHQLAAKKPAFVDASTNQTISYGELQSSVYSLASGLYHGIGIRKGYVVFVLSPNSILYPTICLAVLSIGAILTTANPLNTASEIAKQVKDSGAKLAISAPEMMKKLLPTGVPIILTTRQSDGRMLSVEELIEGCSDNIPEQLPQVKLAQSDTAAILYSSGTTGMSKGVVLTHANIISIVSLLTWSADVTSSQNDVFLGFIPIFHIYGLVFFGLGLLCRGVTSVIMQKFDFKEMLFAIQKYRVNNLPAVPPVILALVKYGGKARFDLSSLKKVGSGAAPLSKELTEEFRKMFPWVELRQGYGLTESCGGATFFVSDKDAKARPGSCGRLLPTFCAKIVDVETGKPLPPGKEGELWLKSPAIMKEYLGNMEATASTLDSEGWLKTGDLAYVDEDGFVYVLERIKELIKHNGYQVAPAELEALLLSHPNIVDAAVIPVEDVETGQIPMAYVVKAAGSEITEDQVIQFAASQVAPYKKIRKVSFIDAIPRSAAGKILRKDLVSHSKMKRVSKL 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5728g00004 614 CDD 4CL 87 602 - -
Pral5728g00004 614 Gene3D - 83 507 IPR042099 -
Pral5728g00004 614 SUPERFAMILY Acetyl-CoA synthetase-like 98 604 - -
Pral5728g00004 614 FunFam 4-coumarate--CoA ligase 2 508 609 - -
Pral5728g00004 614 Gene3D - 508 610 IPR045851 -
Pral5728g00004 614 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 71 604 - -
Pral5728g00004 614 FunFam Long-chain-fatty-acid--CoA ligase FadD 85 507 - -
Pral5728g00004 614 Pfam AMP-binding enzyme 111 511 IPR000873 -
Pral5728g00004 614 ProSitePatterns Putative AMP-binding domain signature. 260 271 IPR020845 -
Pral5728g00004 614 Pfam AMP-binding enzyme C-terminal domain 521 596 IPR025110 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5728g00004 Pral-Chr5728 60105 64777 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5728g00004 63 603 Monolignol Biosynthesis Gene Families AT1G20500 45.803 9.51e-162 472