Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5721g00028 ATGGCTATTCATGGCAATCAAAATTCAGCTTCTGAAGGCATTCTTGAGAACGTGTGGGCTAAAATTATTGACAGCAACAATGGATCACAATGGGGAGAACTGCCTAATCTGCGTGAAAGAGAAGGGTCTTTGGAAGTTCTGAGAAGGCTTCCTAGTTTAGGAAGATGGATATCAATGGGAGCTGAGTTCTGGGAAGAAATCTTAGATGGGTTTCCAGCTTGTAGCAGTAACAATTCAGAAATTTGCAGTGCTTTTGAATGCAATGAGAAGGTTGAAGAAGAAAAAGAAGCAGTGACAGTGAAAGCAGAGAAGAGGGTTTCTGCAAAACACTACAGAGGAGTGAGAAGAAGGCCATGGGGGAAATATGCTGCAGAAATCAGAGACTCATCAAGGAAAGGTGCTAGGGTTTGGCTTGGGACTTTTGACACAGCAGAGGAAGCAGCTTTGGCTTATGATAAGGCTGCTTTGAGAATTAGAGGCCCTAAGGCATACCTGAATTTCCCACTTGAGACTGTCTCAAATGCCTTAGGATTTGACCAGAAAGGAAACTGTGAAGAAAATTTCTGCGGCTCCAGAAAAAGAAGGTGTAGGGAGAGAGATGAACTTGTTGGCATGATGAATGAAGAACCTGCAAAGAAGAAAATGGCAAGCTCGGGAGGGGTGACAGGGAATGAAGAAGATGATGTTTTTGAGTTTCAAGACTTGGGAAGTGATTACTTGGAAAGTTTGTTATCTTCCTTTTGA 744 0.4274 MAIHGNQNSASEGILENVWAKIIDSNNGSQWGELPNLREREGSLEVLRRLPSLGRWISMGAEFWEEILDGFPACSSNNSEICSAFECNEKVEEEKEAVTVKAEKRVSAKHYRGVRRRPWGKYAAEIRDSSRKGARVWLGTFDTAEEAALAYDKAALRIRGPKAYLNFPLETVSNALGFDQKGNCEENFCGSRKRRCRERDELVGMMNEEPAKKKMASSGGVTGNEEDDVFEFQDLGSDYLESLLSSF 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5721g00028 247 SMART rav1_2 110 174 IPR001471 GO:0003700|GO:0006355
Pral5721g00028 247 SUPERFAMILY DNA-binding domain 110 170 IPR016177 GO:0003677
Pral5721g00028 247 FunFam Ethylene-responsive transcription factor 2 109 170 - -
Pral5721g00028 247 Gene3D AP2/ERF domain 109 170 IPR036955 GO:0003700|GO:0006355
Pral5721g00028 247 PRINTS Ethylene responsive element binding protein signature 134 150 IPR001471 GO:0003700|GO:0006355
Pral5721g00028 247 PRINTS Ethylene responsive element binding protein signature 111 122 IPR001471 GO:0003700|GO:0006355
Pral5721g00028 247 ProSiteProfiles AP2/ERF domain profile. 110 168 IPR001471 GO:0003700|GO:0006355
Pral5721g00028 247 Pfam AP2 domain 110 160 IPR001471 GO:0003700|GO:0006355
Pral5721g00028 247 CDD AP2 109 168 IPR001471 GO:0003700|GO:0006355
Pral5721g00028 247 PANTHER DNA-BINDING DOMAIN 92 242 IPR044808 GO:0003700|GO:0009873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5721g00028 Pral-Chr5721 174996 175869 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5721g00028 5 247 AP2-EREBP Transcription Factor Family AT4G18450 36.593 1.56e-39 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pral5721g00028 AP2 2e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5721g00028 - - gmx:112999553 265.388