LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral5721g00023	ATGGAACAAGTATTTAAAGTGTTTCTGCTACTGCTTCTATGCCAATCTCTGCTGGTATCGGCACAGAGCTCCTATGAGGATTTTGTTTCCCTACAATCTCTCACAGAATCTTGGCAGAACAAACCACCAAGCTGGGTGGGTTCAGATCCTTGTGGCAGTGGCTGGGAAGGAATTCGATGCACCAATTTAAGAGTGACCTCAATAATATTAGCAAGCATGAATTTGGTCGGCAAGCTGTCTTCAGATATCCAGTTATTATCTGAGTTAGACACATTGGATCTCTCTTACAACAAGGGCCTGACAGGAACAATTCCGAAAGAGATTGGAAATTTGAGAAAATTAAAAACCCTTATACTGGTTGGTTGTAGTTTCTTTGGCAGTATTCCCGATTCAATAGGATCTTTGCAGCAGCTGAATTTTCTAGCTCTGAACTCCAACCAGTTCAATGGAAACATTCCACCTACCATTGGCAATCTATCCAATATTAATTGGCTAGACCTTTCTGATAACCACCTTGAAGGAGCTATCCCAATCTCTGGGCAAGGAGTACTTGGACTTGAGAAGCTGCTTAAGGCAAAGCACTTTCACATGGGAAACAACAGGCTCTCAGGTGGAATCCCAGCTCAACTTTTTCATTCAGATATGAGTCTGGTCCATGTGCTTTTTGACAGCAATCAATTAAGTGGCGGTATGCCTAGTACCATTGGGGTGGTGAACTCATTGGAGGCAGTCCGTTTTGATAGGAACCAACTAAGTGGAAGTGTACCGTCGAATATCAGCAATCTCAGAAATCTTAGTGATCTACTAGCTCGCAACCGGATTTGCCTTGAAGCAGAAGCTTCTACTGAACGTTACTGCCAAGAATCCCAATCCAATTCCATATATTCAACGCTGCCAAATAATTGCTCACCTCCTCCTTGCAGTTCTGGTCAGATTTCCAGAAATGAATCAAAGAAGTCGTCCCATATAGGGATTATAGTTGGCGTAGTAGTTGCTGTTGTGGTCTTTCTGGCAGTAGCACTCCTTGCAGGGATATATGTTGTACGTCAAAAGAAAAGAGCAAAAGGGTCCGCTGAGCTGAACCCTTTTGCAAACTGGAAACTGAATAAGAACAACGGCATGGCTCCTCAGTTAAAAGGAGCACGATGGTTTTCTTTAGAAGAGCTGAAGAAATACACCAACAACTTCTCTGAAGACAACACAGTTGGATCTGGGGGCTACGGAAAGGTTTACCGAGCTGTTCTTCCCACGGGAGAACTAGTTGCCATCAAACGGGCTGCAGAAGAATCCATGCAGGGTGCTGTAGAGTTTAAAACTGAGATTGAACTTCTATCAAGGGTCCATCATAAGAATCTTGTCGGTCTTGCGGGTTTCTGTTTTGAGAATGGTGAACAAATGCTGGTGTATGAGTATATCCCAAATGGTACTTTAATGGACAGTCTTTCAGGAAAGTCTGGGATCAGAATGGATTGGATGAGAAGGCTTAAAGTAGCCCTGGGCGCAGCCAGGGGTCTGGCCTATCTTCATGAACTTGCCAACCCACCAATCATACACAGGGACATAAAATCAAGCAATATTCTGCTTGATGAGCACCTTAACGCAAAAGTCGCAGATTTCGGACTCTCCAAGCTTCTTGTTGATAGTGAAAGGGGGCATATCACTACTCAAGTCAAAGGGACAATGGGTTACTTGGATCCTGAGTATTACATGACCCAACAGTTGACTGAAAAAAGTGATGTATATAGCTTTGGAGTGCTGATGCTGGAACTAGTGACAGCAAGAAGGCCAATAGAGAAAGGGAAATATATTGTGAGAGAGGTACAGAACGTAATGGATACAACAAAAGAACTATTCAACCTCCATTCCATCATAGATCCATTCATCAACAAAGTAACTCCACGTGGTTTGGACAAGTTTGTGGAGCTGGCAATGAGGTGCGTCAAAGAATATGCAGCTGAGAGGCCATCAATGGCTGAGGTGGTAAAGGAAATTGAGAATATAATGGAGCTCGCTGGATTGAACCCTGCTTCTGAATCAGATCCAACAACAGAAGAAATTGATATGGATGCAAATGGCGGCAAGTTACGCCGTCCTTATGCCCATGATGAAGGCTTTAGCTATAGTGGAGCCTTTCCTTCAACAAAGGTAGAACCTCAGTGA	2160	0.4356	MEQVFKVFLLLLLCQSLLVSAQSSYEDFVSLQSLTESWQNKPPSWVGSDPCGSGWEGIRCTNLRVTSIILASMNLVGKLSSDIQLLSELDTLDLSYNKGLTGTIPKEIGNLRKLKTLILVGCSFFGSIPDSIGSLQQLNFLALNSNQFNGNIPPTIGNLSNINWLDLSDNHLEGAIPISGQGVLGLEKLLKAKHFHMGNNRLSGGIPAQLFHSDMSLVHVLFDSNQLSGGMPSTIGVVNSLEAVRFDRNQLSGSVPSNISNLRNLSDLLARNRICLEAEASTERYCQESQSNSIYSTLPNNCSPPPCSSGQISRNESKKSSHIGIIVGVVVAVVVFLAVALLAGIYVVRQKKRAKGSAELNPFANWKLNKNNGMAPQLKGARWFSLEELKKYTNNFSEDNTVGSGGYGKVYRAVLPTGELVAIKRAAEESMQGAVEFKTEIELLSRVHHKNLVGLAGFCFENGEQMLVYEYIPNGTLMDSLSGKSGIRMDWMRRLKVALGAARGLAYLHELANPPIIHRDIKSSNILLDEHLNAKVADFGLSKLLVDSERGHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELVTARRPIEKGKYIVREVQNVMDTTKELFNLHSIIDPFINKVTPRGLDKFVELAMRCVKEYAAERPSMAEVVKEIENIMELAGLNPASESDPTTEEIDMDANGGKLRRPYAHDEGFSYSGAFPSTKVEPQ	719

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral5721g00023	719	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	516	528	IPR008271	GO:0004672\|GO:0006468
	Pral5721g00023	719	FunFam	LRR receptor-like serine/threonine-protein kinase HSL2	472	680	-	-
	Pral5721g00023	719	FunFam	Leucine-rich repeat family protein	26	181	-	-
	Pral5721g00023	719	PANTHER	RECEPTOR-LIKE PROTEIN 55	295	667	-	-
	Pral5721g00023	719	MobiDBLite	consensus disorder prediction	674	695	-	-
	Pral5721g00023	719	SUPERFAMILY	L domain-like	29	271	-	-
	Pral5721g00023	719	FunFam	Leucine-rich repeat protein kinase family protein	182	278	-	-
	Pral5721g00023	719	SMART	serkin_6	396	668	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral5721g00023	719	CDD	STKc_IRAK	402	667	-	-
	Pral5721g00023	719	Gene3D	Ribonuclease Inhibitor	181	305	IPR032675	-
	Pral5721g00023	719	Gene3D	Ribonuclease Inhibitor	15	180	IPR032675	-
	Pral5721g00023	719	SUPERFAMILY	Protein kinase-like (PK-like)	382	675	IPR011009	-
	Pral5721g00023	719	Gene3D	Transferase(Phosphotransferase) domain 1	472	686	-	-
	Pral5721g00023	719	Pfam	Protein kinase domain	397	662	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral5721g00023	719	ProSiteProfiles	Protein kinase domain profile.	396	668	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral5721g00023	719	ProSitePatterns	Protein kinases ATP-binding region signature.	402	424	IPR017441	GO:0005524
	Pral5721g00023	719	FunFam	Leucine-rich repeat protein kinase family protein	364	471	-	-
	Pral5721g00023	719	Gene3D	Phosphorylase Kinase; domain 1	366	471	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral5721g00023	Pral-Chr5721	143647	150509	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral5721g00023	317	719	Receptor kinase-like Gene Family	AT5G49760	63.793	2.47e-159	483

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-VIII-1	Pral5721g00023		Pkinase	2e-48	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral5721g00023	-		-	gmx:100796868	987.252