Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5721g00007 ATGACATGGTGCAATGAGTCCAAAGATGAGGAAGGCATTCAAATGAGCAATCCCAAAACCTCTGAAACGCAAATCATAACTTGCCCTTCATGCGGACATACCCTAGAATTTCAAGATCAGGGTGATATACTGAACGAATTGCCGGGGCTGCCATCTGGGGTGAAGTTTGATCCGAACGAGCAGGAGATTTTAGAGCATTTGGAAGCCAAGGTTGAGTGTGATGTTCGTAAACTTCATCCTCTTATTGATCAGTTCATTCCGACTCTTGAAGGCGAAAATGGTATCTGTTATACGCACCCAGAAAAGCTACCAGGAGTAAGCAAAGATGGGCAGATTCGCCACTTCTTCCACAGGCCATCAAAAGCATACACAACTGGGACAAGGAAAAGAAGAAAGGTTCACTGTACAGACGAAGAAGGAGGCGAAACAAGATGGCACAAAACAGGCAAAACAAGACCAGTCTTCGTTAATGGTGCACTCAAGGGTTTCAAGAAGATACTTGTTCTTTATACTAACTATGGCAGAAAAAGGAAGCCCGAGAAGACCAGCTGGGTGATGCATCAGTACCACCTCGGAACCAACGAAGAAGAGAAAGAAGGACAACTCGTTGTTTCCAAGGTTTTCTACCAGACGCAACCCAGACAATGCGGTTCCATTAACAATAATAATATCATTAAAGATAATCCTTATGATCATCAGAAAACGTCCAACGACCAAACGGGAAGTAATGATCGTGACACGTGCAGTGCAATAATACCTAATAAGAGTGGATCTGGTGTTTTAGACTACTACAGTTCTCCTTACATGAGTTATGACCATGTGATGGTGGGTCATAATAACAACGTTAGAGAAAGTTCACCTCAACTTATTCCAAACTTGGTCGTCCAAGGTGATCCCTCTTCTTTCTTTTCATTTAGCCATGGATTGAAGCAAAGAAAGACATGA 945 0.4275 MTWCNESKDEEGIQMSNPKTSETQIITCPSCGHTLEFQDQGDILNELPGLPSGVKFDPNEQEILEHLEAKVECDVRKLHPLIDQFIPTLEGENGICYTHPEKLPGVSKDGQIRHFFHRPSKAYTTGTRKRRKVHCTDEEGGETRWHKTGKTRPVFVNGALKGFKKILVLYTNYGRKRKPEKTSWVMHQYHLGTNEEEKEGQLVVSKVFYQTQPRQCGSINNNNIIKDNPYDHQKTSNDQTGSNDRDTCSAIIPNKSGSGVLDYYSSPYMSYDHVMVGHNNNVRESSPQLIPNLVVQGDPSSFFSFSHGLKQRKT 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5721g00007 314 SUPERFAMILY NAC domain 44 210 IPR036093 GO:0003677|GO:0006355
Pral5721g00007 314 ProSiteProfiles NAC domain profile. 50 210 IPR003441 GO:0003677|GO:0006355
Pral5721g00007 314 FunFam NAC domain-containing protein 73 59 214 - -
Pral5721g00007 314 Gene3D NAC domain 59 216 IPR036093 GO:0003677|GO:0006355
Pral5721g00007 314 MobiDBLite consensus disorder prediction 219 245 - -
Pral5721g00007 314 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 14 233 IPR044799 GO:0003700
Pral5721g00007 314 Pfam No apical meristem (NAM) protein 51 191 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5721g00007 Pral-Chr5721 53386 56904 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5721g00007 1 230 NAC Transcription Factor Family AT4G28500 66.390 7.70e-118 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral5721g00007 NAM 2.3e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5721g00007 - - gmx:100795920 428.713