Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5719g00047 ATGGAGAAGCTCCCCAGCTTTGTCGTCAGTGGAGGCGTCAAGCTTCCCATTGGCTACCGTTTCTGTCCCACCGATGAAGAGCTTGTCATTCACTACCTCAAGAGGAAGGCCTTCTCTCACCCCTTACCCGCCTCCGTCATTCCCGACTTCGACGTCTTCGCCGCCCACCCTTCCCGCCTCCCAGGTGTCGGTGATTCCAAGGAAAAGAGATATTTCTTTAGCCATAGAAGGGAGCATATTCACAAGAGGCCTGCTGCTTCTGGGTACTGGAAAAGCATAGGCAATGACAAGCAAATTATTGCTTCTGAGAACAACCGAGTGGTTGGGATGAGGAAGACTCTGGTTTTCTGTGAAGCCAAACGTTCCCGTGAGGCTCGTACTCGGTGGGTCATGCATGAATTGCGCCTTCTTCCTTCTGAAACACCTTCCTACCCATCACACCAGGTGGCAGCAGCAGATTGGGCTGTGTATCGCATATTTCAAAAGAGGAAGCTTAAGAGAAGAGGATCTAATGGTCAACTCTCTAATATGAGGAAAGTTCAGGGATTAGAGGAAGAGATCAAACCCAGTTTCATAGATTTCACAGCGGAATGTGGGAGTGACACAGGACCTCCCCCACCTAGTTCTCCATGTTCAAGCGAAAGCAGTGAAATCGCTTCTAACAAGCTAGATTAG 675 0.4963 MEKLPSFVVSGGVKLPIGYRFCPTDEELVIHYLKRKAFSHPLPASVIPDFDVFAAHPSRLPGVGDSKEKRYFFSHRREHIHKRPAASGYWKSIGNDKQIIASENNRVVGMRKTLVFCEAKRSREARTRWVMHELRLLPSETPSYPSHQVAAADWAVYRIFQKRKLKRRGSNGQLSNMRKVQGLEEEIKPSFIDFTAECGSDTGPPPPSSPCSSESSEIASNKLD 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5719g00047 224 PANTHER NAC TRANSCRIPTION FACTOR 56 15 176 - -
Pral5719g00047 224 SUPERFAMILY NAC domain 10 162 IPR036093 GO:0003677|GO:0006355
Pral5719g00047 224 Gene3D NAC domain 24 166 IPR036093 GO:0003677|GO:0006355
Pral5719g00047 224 MobiDBLite consensus disorder prediction 195 224 - -
Pral5719g00047 224 ProSiteProfiles NAC domain profile. 15 162 IPR003441 GO:0003677|GO:0006355
Pral5719g00047 224 Pfam No apical meristem (NAM) protein 16 136 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5719g00047 Pral-Chr5719 274428 275806 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5719g00047 7 171 NAC Transcription Factor Family AT5G13180 46.471 2.07e-41 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral5719g00047 NAM 1.2e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5719g00047 - - qsu:111996957 231.491