Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5719g00004 ATGGCAACGGTGAAGTCGACGGCGGCGAGAACAAAATTGATTGGTTCTGGCATGTCTGTTAAACCCCCGGCTGAGCTGGAGAAGAGAAAACACAAGCTCAAGCGTCTTGTCCAGTCTCCAAACTCCTTCTTCATGGATGTGAAGTGTCAGGGTTGCTTCAACATAACCACTGTTTTCAGCCACTCTCAGACTGTTGTAGTATGTGGCAACTGCCAAACTGTCTTGTGCCAGCCCACAGGTGGGCGGGCGAGGCTAACAGAGGGCTGCTCTTTTAGGAAGAAGGGAGACTAA 291 0.5086 MATVKSTAARTKLIGSGMSVKPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQTVLCQPTGGRARLTEGCSFRKKGD 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5719g00004 96 ProSitePatterns Ribosomal protein S27e signature. 48 80 IPR000592 GO:0003735|GO:0005840|GO:0006412
Pral5719g00004 96 FunFam 40S ribosomal protein S27 13 96 - -
Pral5719g00004 96 Pfam Ribosomal protein S27 40 94 IPR000592 GO:0003735|GO:0005840|GO:0006412
Pral5719g00004 96 Hamap 30S ribosomal protein S27e [rps27e]. 34 94 IPR000592 GO:0003735|GO:0005840|GO:0006412
Pral5719g00004 96 Gene3D - 19 95 IPR023407 -
Pral5719g00004 96 SUPERFAMILY Zn-binding ribosomal proteins 40 94 IPR011332 GO:0006412
Pral5719g00004 96 PANTHER 40S RIBOSOMAL PROTEIN S27 22 96 IPR000592 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5719g00004 Pral-Chr5719 42215 44425 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5719g00004 20 96 Cytoplasmic Ribosomal Protein Gene Family AT3G61110 92.208 4.95e-52 156