Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5718g00013 ATGAGTTTTCAAGATATTCAGGGCGGACCCAAGCGACCCGCTTCCCGAACTCAATCACCATCCCAGGCGGTGGCTGCTGGGATTTTCCAGATCAATACAGGCGTTGCCACTTTTCGACGACTTGTTGATGCCATTGGAACCGTCAAAGACACCGTCGGTCACCGCCAGAAGCTGCACGATACGAGGCAGCGGATACTGCAGCTGGTGAAGGATACTTCTGCAAAGCTCAAAGCCTTGAGCGAATCCGATATTGCTGCCGATGCCGATTCTGGTAAGAAAATTGAAGATGCTAAGCTGGCGAGAGATTTCCAAACCACGTTACAAGAATTCCAGAGAGTGCAACAGCTTGCTTCCGAGCGTGAATCTAACTACCTTCCTGCTGCTCCTGCTTCTTCTCTACCAGCAAGCTCTGGTTCTGTCGGAGAATCAACTGACATAGGTCAGGAAAGCCAACCTTTTATCAGGGAACAAAAGAGGCAGGAGATACGCTTATTGGATAATGAAATCGCATTCAATGAGGCCATGATTGAAGAAAGAGAACAGGGCATCAAGGAGGTAGAGGTGCAAATTGGACAAGTAAATGAAATATTCAAGGACTTAGCCGTTCTGGTTCATGAGCAGGGGGTAGTTATTGATGATATTCAATCAAATATTGGTGCTACTGCGGGTGCAACAACCCAAGCTACTACACAGTTAGCCAAGGCTTCCAAAAGTATGAAATCTAAATCTTCATGGTGTTGGTGGGTGGCTATAATTTTTGTAATTGTGGTGATCGTTGTGATTATTTTGCTCATTATTTAG 801 0.4594 MSFQDIQGGPKRPASRTQSPSQAVAAGIFQINTGVATFRRLVDAIGTVKDTVGHRQKLHDTRQRILQLVKDTSAKLKALSESDIAADADSGKKIEDAKLARDFQTTLQEFQRVQQLASERESNYLPAAPASSLPASSGSVGESTDIGQESQPFIREQKRQEIRLLDNEIAFNEAMIEEREQGIKEVEVQIGQVNEIFKDLAVLVHEQGVVIDDIQSNIGATAGATTQATTQLAKASKSMKSKSSWCWWVAIIFVIVVIVVIILLII 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5718g00013 266 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 173 235 IPR000727 -
Pral5718g00013 266 Pfam Syntaxin-like protein 25 124 IPR006011 GO:0016020
Pral5718g00013 266 SMART SynN_4 8 122 IPR006011 GO:0016020
Pral5718g00013 266 SUPERFAMILY t-snare proteins 18 228 IPR010989 GO:0016020|GO:0016192
Pral5718g00013 266 Gene3D - 11 132 - -
Pral5718g00013 266 MobiDBLite consensus disorder prediction 1 21 - -
Pral5718g00013 266 Gene3D - 166 266 - -
Pral5718g00013 266 FunFam Syntaxin-22 like 166 266 - -
Pral5718g00013 266 FunFam Syntaxin-22 like 15 128 - -
Pral5718g00013 266 SMART tSNARE_6 168 235 IPR000727 -
Pral5718g00013 266 PANTHER SYNTAXIN 22 256 IPR045242 -
Pral5718g00013 266 MobiDBLite consensus disorder prediction 125 149 - -
Pral5718g00013 266 CDD SNARE_Qa 176 218 - -
Pral5718g00013 266 Pfam SNARE domain 210 261 IPR000727 -
Pral5718g00013 266 MobiDBLite consensus disorder prediction 129 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5718g00013 Pral-Chr5718 39266 42342 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5718g00013 1 253 SNARE and Associated Proteins AT5G46860 57.198 2.33e-92 272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5718g00013 - - gmx:100787141 349.747