Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5717g00047 ATGGCTGACAGTAATGAATCAGACAAGAACATTGAGATATGGAAGATCAAGAAATTGATTAAAGCATTGGAAGCTGCAAGAGGTAATGGCACCAGCATGATTTCTTTAATAATGCCTCCTCGTGATCAAATATCCAGAGTCACCAAGATGTTGGGAGATGAATTTGGAACTGCTTCAAACATCAAAAGCAGGGTGAATCGACAGTCAGTATTGGGAGCCATTACTTCAGCGCAACAGAGGTTGAAGTTATATAACAAGGTTCCTCCAAATGGATTGGTTCTTTATACTGGAACTGTTGTCACTGAAGATGGCAAAGAAAAAAAGGTGACCATCGATTTTGAACCTTTCAGGCCTATTAATGCGTCCCTTTACCTTTGTGATAACAAGTTTCACACTGAAGCTTTAAATGAGCTTTTAGAATCTGATGACAAATTTGGTTTCATTGTAATGGATGGAAATGGTACCCTTTTTGGGACATTAAGTGGAAATACTCGTGAGGTGCTTCATAAATTTACCGTTGACCTACCAAAGAAACATGGTAGAGGAGGACAGTCTGCCTTGCGTTTTGCTCGTCTTCGAATGGAAAAACGACACAACTATGTTAGAAAGACTGCAGAACTTGCCACACAGTTTTTCATTAATCCTGCCACTAGTCAGCCTAATGTTGCTGGACTTATACTTGCAGGTTCTGCTGACTTCAAGACTGAGCTGAGCCAGTCAGATATGTTTGACCCTCGTCTAGCGGCAAAAATATTGAATGTGGTTGATGTTTCATATGGTGGGGAAAATGGTTTTAATCAAGCTATTGAGTTATCTGCCGAGATTTTGTCAAATGTGAAGTTCATACAAGAAAAAAAGTTGATAGGGAAATACTTTGAAGAGATCAGCCAGGATACTGGTAATACTGGTGAGACTGTCGTAAAGCACTTAAACAAGGATCAAGAGGCTGATGAAACCAATTTCCGGGATTCAGCCACCTCTGCGGAGTTGGAGACGCAGGACAAGATGCCTTTGCTGGAGTGGTTTGCCAATGAGTACAGGCGATATGGTTGCTCGCTGGAGTTTGTGACCAATAAATCTCAAGAAGGATCACAGTTTTGCAGAGGGTTTGGTGGCATCGGAGGTATCCTTCGCTACCAGCTTGATCTCAGATCATTTGATGAGTTCTCTGATGACGGAGAAGTGTATGAGGATTCTGATTAA 1203 0.414 MADSNESDKNIEIWKIKKLIKALEAARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTVVTEDGKEKKVTIDFEPFRPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVAGLILAGSADFKTELSQSDMFDPRLAAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKKLIGKYFEEISQDTGNTGETVVKHLNKDQEADETNFRDSATSAELETQDKMPLLEWFANEYRRYGCSLEFVTNKSQEGSQFCRGFGGIGGILRYQLDLRSFDEFSDDGEVYEDSD 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5717g00047 400 SUPERFAMILY L30e-like 278 383 IPR029064 -
Pral5717g00047 400 Gene3D - 300 400 IPR029064 -
Pral5717g00047 400 Pfam eRF1 domain 3 281 381 IPR005142 -
Pral5717g00047 400 SMART eRF1_1_2 4 140 IPR005140 -
Pral5717g00047 400 Pfam eRF1 domain 1 18 138 IPR005140 -
Pral5717g00047 400 FunFam Eukaryotic peptide chain release factor subunit 1 2 135 - -
Pral5717g00047 400 PANTHER PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1 3 301 IPR004403 GO:0003747|GO:0006415
Pral5717g00047 400 FunFam Eukaryotic peptide chain release factor subunit 1 136 277 - -
Pral5717g00047 400 SUPERFAMILY Translational machinery components 142 276 - -
Pral5717g00047 400 Pfam eRF1 domain 2 144 277 IPR005141 -
Pral5717g00047 400 NCBIfam peptide chain release factor aRF-1 12 301 IPR004403 GO:0003747|GO:0006415
Pral5717g00047 400 Gene3D eRF1 domain 1 1 135 IPR024049 -
Pral5717g00047 400 SUPERFAMILY N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 6 140 IPR024049 -
Pral5717g00047 400 Gene3D eRF1 domain 2 136 277 IPR042226 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5717g00047 Pral-Chr5717 200499 203349 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5717g00047 1 400 Eukaryotic Initiation Factors Gene Family AT3G26618 82.380 0.0 735