Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5717g00041 ATGGGGTCGCTTCATCATCAGCACGAAGCTCAGCCTCGGCTTCAAGATCTGAACGTGAAAATCCAGCAGAGGTCGATGGTTTTTCCATCAAAGCCAACCCAGAAAAGATCCTTGTTCTTATCAAACATAGACAGAGTCTTAAACTTCGACGTAGAAACAGTTCACTTCTTTGCGTGTCGAAAGGATTTTCCGGCGGACGTTGTGGCGGACAGGTTGAAGAAGGCACTAGCCGATGCTACGGTGGCTTATGATTTCTTTGCAGGAAGATTGAAGATAAACAGTGAGGCAGGTAGGTTGGAGATAGAGTGCAATGGCGCAGGAGTTGGGTTCGTGGAGGCTTCTTGTGACTACGAATTGGACGACATGGGAGACTTGACGTATCCTAATCCAGCTTTTGCACAGTTGGTTCACCAGAACAAGGATTACCTCAAACCAGGCGACCACCCTCTATGCGTTGTCCAGGTGACATTCTTCAAGTGTGGCGGCTTTGCGATGGGCTTCTCCACCAGCCACACCACCTTCGACGGCCTGAGCTTCAAGACCTTCCTGGACAACCTCGCCGCCCTGGCCGCTAACAAGCCCTTGTCTGTCACTCCCTGCCACGACAGGCACCTCCTAGCCGCTCGATCCCCTCCACGAGTCACCTTCTCCCACCCCGAACTGCTCAAGCTCGGCACCAGCCTCCCCGACACCGACCCTCACACGGGCGTCTTCCATGCCTCCTCCGAGGATCTCGACTTCAAGATCTTCCGGCTCACCTCCGACGACATCTCCTCCCTCAAGGACAAGGCCAAATCCGCCGAGGGCAGCCCGCCCACCGCTCGCATCAGCGGCTTCAACGTCATCACCGCCCATGTGTGGAGGTGCAAGGCCTTATCTGCAGGCGACGACCCTAACCGGTCGTCGACCATACTCTACGCGGTGGACATACGGGGGAGGGTGAACCCTCCGCTGCCAAAATCATACGCGGGGAACGCGGTGCTGTCAGCGTATGCGACGGCGAGGGTGAGAGAGCTGGAAGAATGGCCGTTGGGGAAGTTGGCAGATATGGTGAGGGAGGGAGCGATGAGGATGACGGACGAGTATGCGAGATCGGCGATTGACTGGGGAGAGATGTACAGTGGGTTTCCGAACGGGGAAGTGCTGGTGTCATCGTGGTGGAAATTAGGTTTTGCAGAAGTGGAGTACCCATGGGGAAAGCCCAAGTATAGTTGTCCAGTGGTAAACCACAGGAAGGATATCATACTCTTGTTTCCTCCCATTGAAGGAGAAGGTCACGGCGTGAATGTGCTGGTGGCTTTACCGCCTAAGGAAATGGACAAGTTCCACGGCCTCTTCTACAAGTTGATGGTTTCTGAAGACTGA 1365 0.548 MGSLHHQHEAQPRLQDLNVKIQQRSMVFPSKPTQKRSLFLSNIDRVLNFDVETVHFFACRKDFPADVVADRLKKALADATVAYDFFAGRLKINSEAGRLEIECNGAGVGFVEASCDYELDDMGDLTYPNPAFAQLVHQNKDYLKPGDHPLCVVQVTFFKCGGFAMGFSTSHTTFDGLSFKTFLDNLAALAANKPLSVTPCHDRHLLAARSPPRVTFSHPELLKLGTSLPDTDPHTGVFHASSEDLDFKIFRLTSDDISSLKDKAKSAEGSPPTARISGFNVITAHVWRCKALSAGDDPNRSSTILYAVDIRGRVNPPLPKSYAGNAVLSAYATARVRELEEWPLGKLADMVREGAMRMTDEYARSAIDWGEMYSGFPNGEVLVSSWWKLGFAEVEYPWGKPKYSCPVVNHRKDIILLFPPIEGEGHGVNVLVALPPKEMDKFHGLFYKLMVSED 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5717g00041 454 Pfam Transferase family 18 445 - -
Pral5717g00041 454 Gene3D - 234 449 IPR023213 -
Pral5717g00041 454 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 25 442 - -
Pral5717g00041 454 Gene3D - 15 222 IPR023213 -
Pral5717g00041 454 SUPERFAMILY CoA-dependent acyltransferases 27 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5717g00041 Pral-Chr5717 189351 203820 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5717g00041 17 449 Monolignol Biosynthesis Gene Families AT5G48930 31.920 8.32e-57 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5717g00041 K13065 - gmx:100305576 651.744