Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5717g00035 ATGAGACCCCTTCAGTCCAATCTCCCTCCTGGTTTTAGGTTCCACCCCACCGACCAAGAGCTTATCCTTCACTACCTCAGCAAGAAGATCGCTTCTTTGCCCCTCCCCGTCTCTGTCATTGCTGAGGTCGATATCTACAAGTTTGACCCTTGGGATTTACCAGGAAAAGCTGCGTTTGGAGAAAAAGAATGGTACTTCTTCAGTCCCAGGGATCGAAAGTACCCGAACGGAGCGAGGCCGAACAGGGCGGCTGGTTGTGGGTATTGGAAGGCCACTGGTACGGACAAGAACATCGTATCCCCATCACTGTCCGGTGGATCACAGGGGAGCATTGGTGTGAAGAAAGCTCTCGTTTTCTACAAAGGAAGGCCCCCAAAAGGTGTCAAAACCAATTGGATCATGCACGAATATCGCCTTGCTCACGACAACAAAAAACCCATTAAGCTCAGAGACACCTCCATGAGGCTAGATGATTGGGTTCTGTGCCGGATATACAACAAGTCCAAGCATGCCGCGTCGACGCCGACCCAAGAGGCTCCGGCCATGGTGGCTGATCAAGTACAAGATCAGAAGGTTTTCAGAGAAGCCCTTTTGCCAACTTCAACCGGCAGTGCCATGAACCCCCATCTTCCTCCTCGCCCCACCACGCTCACATCTGACAAGTCTCTCTCTTTCTCCAATCTGTTAGATGCCATGGACTACTCTATGTTGAGCAGTTTCCTGTCTGATCAGAGCCACTCCAACCCCACTGCTCCGCCTTCTGTTAACGGTGCCGGCGGCAATATTCCGGATCACCACTTCTTAACTGTGCCTCCATTGAGCAGTCCAGTCCCAAACACGGAACATAGCATGCCCAAACGACAGCTTCCTAACGGGGACGACGATGCCTTGCGCCCATCCAAGAAATATCAGCCGACTTCTCGCAGCTTCCCAGAAACCAACCATCAATACGAGAATAGTAATCCACAATGGAACTTCCTCCACAAGCAGCCGTTGTTGAGTCAGCAGTTGCTTCTAGGTCCTCATCTTCGATTTCAGGGATAA 1044 0.5134 MRPLQSNLPPGFRFHPTDQELILHYLSKKIASLPLPVSVIAEVDIYKFDPWDLPGKAAFGEKEWYFFSPRDRKYPNGARPNRAAGCGYWKATGTDKNIVSPSLSGGSQGSIGVKKALVFYKGRPPKGVKTNWIMHEYRLAHDNKKPIKLRDTSMRLDDWVLCRIYNKSKHAASTPTQEAPAMVADQVQDQKVFREALLPTSTGSAMNPHLPPRPTTLTSDKSLSFSNLLDAMDYSMLSSFLSDQSHSNPTAPPSVNGAGGNIPDHHFLTVPPLSSPVPNTEHSMPKRQLPNGDDDALRPSKKYQPTSRSFPETNHQYENSNPQWNFLHKQPLLSQQLLLGPHLRFQG 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5717g00035 347 FunFam NAC transcription factor 56 17 172 - -
Pral5717g00035 347 ProSiteProfiles NAC domain profile. 8 167 IPR003441 GO:0003677|GO:0006355
Pral5717g00035 347 Pfam No apical meristem (NAM) protein 9 139 IPR003441 GO:0003677|GO:0006355
Pral5717g00035 347 MobiDBLite consensus disorder prediction 302 320 - -
Pral5717g00035 347 PANTHER NAC TRANSCRIPTION FACTOR 56 8 215 - -
Pral5717g00035 347 SUPERFAMILY NAC domain 5 167 IPR036093 GO:0003677|GO:0006355
Pral5717g00035 347 MobiDBLite consensus disorder prediction 241 320 - -
Pral5717g00035 347 Gene3D NAC domain 17 172 IPR036093 GO:0003677|GO:0006355
Pral5717g00035 347 MobiDBLite consensus disorder prediction 241 255 - -
Pral5717g00035 347 MobiDBLite consensus disorder prediction 287 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5717g00035 Pral-Chr5717 141302 143052 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5717g00035 5 347 NAC Transcription Factor Family AT3G04070 48.725 6.44e-100 297
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral5717g00035 NAM 3.6e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5717g00035 - - gmx:100301906 424.476