Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5717g00034 ATGCAAGAGCCGATCATGGTCGACAAAGGAGAGGAGGCCCTGGATTTGCCTCCGGGTTTCAGATTTCATCCCACGGACGAGGAGATCATCACTTGCTACCTTACGGAGAAGGTCTTGAATAGCAGTTTCAGTGCAACTGCTATTGGTGAAGCTGATCTGAACAAGTGCGAACCTTGGGATCTCCCTAAGAGAGCGAGGATGGGGGAGAAAGAGTGGTACTTCTTCTGTCAAAGAGACAGGAAGTATCCGACGGGGACGAGGACGAATAGGGCGACGGATTCTGGGTACTGGAAGGCCACCGAAGATAAGGAGATTTACAGAGGCAAAGGGAACCTCGTGGGGATGAAGAAGACCCTCGTCTTCTACGGAGGGAGAGCTCCTAAAGGCGAGAAGACTGGCTGGGTTATGCATGAGTTCCGATTGGAAGGAAAATTCGCCGCTTATAACCTTCCCAAGGCCGCTAAGGATGAATGGGTGGTGTGCAAGATTTTCCACAAGAACACAGACGTCAAAAGCCCCCCTATTCCTGAGCTTCTAAGGATCAACTCTTTCGGAGACCATCTGCCGGATTTCTCTCCGTCGCTCCCGCCTCTCATGGATCCAGCTTGCTTCAGTAACGCCGAACCCTGGCTACAGTGGCGGCGATGGATTCAAGGTGGCCAACCAGCAGCCGTCATGGGACGGTTATTATCTCTCCAACTTCGCCTGCAACGACCATCTCAGTAA 726 0.5234 MQEPIMVDKGEEALDLPPGFRFHPTDEEIITCYLTEKVLNSSFSATAIGEADLNKCEPWDLPKRARMGEKEWYFFCQRDRKYPTGTRTNRATDSGYWKATGXDKEIYRGKGNLVGMKKTLVFYGGRAPKGEKTGWVMHEFRLEGKFAAYNLPKAAKDEWVVCKIFHKNTDVKSPPIPELLRINSFGDHLPDFSPSLPPLMDPACFSNAEPWLQWRRWIQGGQPAAVMGRLLSLQLRLQRPSQ 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5717g00034 242 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 15 172 - -
Pral5717g00034 242 SUPERFAMILY NAC domain 12 168 IPR036093 GO:0003677|GO:0006355
Pral5717g00034 242 FunFam NAC domain-containing protein 100-like 25 171 - -
Pral5717g00034 242 Gene3D NAC domain 25 172 IPR036093 GO:0003677|GO:0006355
Pral5717g00034 242 Pfam No apical meristem (NAM) protein 17 142 IPR003441 GO:0003677|GO:0006355
Pral5717g00034 242 ProSiteProfiles NAC domain profile. 16 167 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5717g00034 Pral-Chr5717 128877 130037 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5717g00034 5 209 NAC Transcription Factor Family AT5G18270 70.423 1.03e-109 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral5717g00034 NAM 6.3e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5717g00034 - - pcin:129284658 377.867