Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5717g00024 ATGGATGTGTGCCGGAATGTATCAGTTTCCGGTGAGTGCAAGCAAGAACAGGTTCTCTCCCCTTCTTGCTCAAAGCTTTCTTCCTTATCAACCAGCCTCGATGACCTCTTCTCTGCTCAGAACACGGAGGTGGATGTCGGATTGGAGTGGCTGTCAGTGTTTGTGGAAGACTGCTTTTCCAGTCAAGCAAGCTGCCTCTTGGTACCTCCTGATGTTCATCAAGCTACAGCCACAACCTCCAAACCTTCAAAACCATTGCAGAGACCCCACCAGAATGAGTCTTCTCTACAAAATTTTGCGGTGCCCGGAAAGGCCAGAAGCAAAAGGAAGAGGCTTTCAGCCCCGAGAGCCAAAGACCCTTTAAGCGTCTGGTCACACCATTTAAACCCACAAAACGAAGCCATAAGCTCAGACCCTCCTCTCCTCAAACAGACGTACTGGTTAGCAGACAGTGAACTCATCGTCCCCGACAAGAAAGAAAAGGCAGAAGAAAGCAAAGAGGAGGAGGAAGAAGAAGAAGTAGAGGCGGAGAAGACGATGATGGTGAGGAAGGAGTCGTCGGAGAGTGAGGTCAGCAATGGGCAAAATCCAATGCCAAGGAGGTGCAGTCACTGCTTGGCACAGAGGACCCCACAATGGAGAGCAGGACCATTGGGTCCGAAAACACTATGCAATGCATGTGGGGTGAGGTACAAGTCTGGTAGGTTGTTGCCAGAGTATAGACCAGCCAAGAGTCCAACTTTTGTGAGCTACTTGCACTCCAATTCCCACAAGAAGGTCATGGAGATGAGGATGTCCCTTGTTTCTTCTTCTTCCTCCGTTCCCAGGGAGCACCAGTGA 840 0.5024 MDVCRNVSVSGECKQEQVLSPSCSKLSSLSTSLDDLFSAQNTEVDVGLEWLSVFVEDCFSSQASCLLVPPDVHQATATTSKPSKPLQRPHQNESSLQNFAVPGKARSKRKRLSAPRAKDPLSVWSHHLNPQNEAISSDPPLLKQTYWLADSELIVPDKKEKAEESKEEEEEEEVEAEKTMMVRKESSESEVSNGQNPMPRRCSHCLAQRTPQWRAGPLGPKTLCNACGVRYKSGRLLPEYRPAKSPTFVSYLHSNSHKKVMEMRMSLVSSSSSVPREHQ 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5717g00024 279 PANTHER GATA TRANSCRIPTION FACTOR 20 269 - -
Pral5717g00024 279 SMART GATA_3 196 250 IPR000679 GO:0006355|GO:0043565
Pral5717g00024 279 MobiDBLite consensus disorder prediction 158 199 - -
Pral5717g00024 279 Pfam GATA zinc finger 202 236 IPR000679 GO:0006355|GO:0043565
Pral5717g00024 279 Coils Coil 155 179 - -
Pral5717g00024 279 ProSiteProfiles GATA-type zinc finger domain profile. 200 232 IPR000679 GO:0006355|GO:0043565
Pral5717g00024 279 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 197 260 - -
Pral5717g00024 279 CDD ZnF_GATA 201 248 IPR000679 GO:0006355|GO:0043565
Pral5717g00024 279 MobiDBLite consensus disorder prediction 75 123 - -
Pral5717g00024 279 MobiDBLite consensus disorder prediction 75 101 - -
Pral5717g00024 279 Gene3D - 191 264 IPR013088 GO:0006355|GO:0008270
Pral5717g00024 279 FunFam GATA transcription factor 191 277 - -
Pral5717g00024 279 ProSitePatterns GATA-type zinc finger domain. 202 227 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5717g00024 Pral-Chr5717 87722 89368 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5717g00024 20 264 C2C2-Gata Transcription Factor Family AT4G32890 39.764 1.73e-42 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Pral5717g00024 GATA 7.2e-15 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5717g00024 - - pcin:129284700 439.499