Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5717g00010 ATGCCAGAGTTGAGAAGTGGAGCTAGAAGATCGAAACGACTTGGTGATCTTCAGCCTGCCCCACTGCCTGTTGATCAAGGAGAGAATTGTGCACAACCTGCTCCAACTAGAGCCAGGAGGAGGGTTGGAGGTGGAAGAGGACGTGGTAATGCCACAGCTGTAGCAAAAGGACCTTCACCAGCGGTACCCACAAGGCGAACTGCAGCTGGTCGAGGTCGGGGAGTAAGATTAATTAATCTTGACCCTGAACCTTGTGAGGTCCTGCCTGATCAAGTTGGACTAGGAGCCCCAGAACCCCTACGTGTTGAGGCAGCGGCCAACAATAAAATTGTGATGGAAGGTGGAAGTGCAGACAAGGTGGTTGGAGCTGAAGAGGAAGCTACCACGACCCCTATTCCTGAGAGGGTTCAAGTTGGTACTTCTCCAATGTACAAGATTGAAAGGAAATTGGGTAAGGGTGGTTTCGGTCAAGTGTATGTCGGCAGAAGGGTAAGTGGTGGCTCTGATCGGACAGGTCCTGATGCAATTGAGGTTGCACTGAAGTTTGAGCACAGAAATAGTAAAGGTTGCAATTATGGACCTCCTTATGAGTGGCAGGTCTACAATACTTTGAATGGGTGTTATGGCATTCCCTGGGTTCATTACAAGGGTCGACAAGGAGATTTCTATATTCTGGTCATGGACATGCTTGGACCCAGTCTTTGGGATGTATGGAATTCACTTAGCCAATCGATGTCACCAAATATGGTTGCCTGCATTGCTGTGGAAGCAATATCAATTCTTGAGAAGCTCCACATGAAAGGGTTTGTGCACGGAGATGTAAAACCAGAAAACTTTTTACTTGGTCAACCTGGAACGGCTGATGAGAAGAAGCTATATCTTATTGATCTTGGGTTGGCTTCAAGATGGAAGGATGCATCATCTGGTCAGCATGTTGACTATGACCAGAGACCTGATATTTTCAGGGGAACAATAAGGTATGCCAGCGTGCATGCACATTTAGGTAGGACAGGAAGTCGAAGGGATGATCTTGAGTCACTGGCCTACACGCTAATATTTCTCATAAAAGGGAGGTTACCGTGGCAGGGTTATCAGGGTGACAATAAAAGTTTTCTTGTCTGTAAGAAGAAGATGTCCACTTCTCCGGAGTTAATGTGTTGCCTTTGTCCCGCCCCATTCAAACAGTTCCTTGAAGCTGTTACTAACATGAGATTTGATGAAGAGCCAAATTATTCCAAGCTTATATCTTTTTTTGAAAGCTTGATTGAACCATGTGTACCAATGAGACCGATCAGAATTGATGGAGCTTTAAAGGTTGGACAAAAGCGTGGGAGGATGCTTATTAACCTGGAAGAAGATGAGCAGCCAAAGAAGAAAGTACGCATGGGGAGTCCTGCTACACAGTGGATTTCAGTCTATAATGCACGTCGTCCCATGAAGCAAAGGTACCATTACAATGTGGCAGACACAAGACTTCGTCAGCATGTAGACAAGGGTAATGAGGATGGGTTGTATATCAGCTCTGTGGCCTCCTCATCAAATCTGTGGGCCCTAATCATGGATGCAGGAACAGGTTTTTCTTCCCAGGTGTATGAATTGTCACCTGTCTTCCTGCATAAGGACTGGATTATGGAACAGTGGGAGAAAAATTATTATATCAGTTCAATAGCTGGTGCAACTAATGGGAGTTCCTTGGTCGTCATGTCAAAGGGAACTCCTTACACACAGCAATCCTACAAAGTGAGTGAATCATTTCCCTTCAAATGGATTAATAAGAAGTGGAAAGAAGGATTCCATGTTACCTCCATGACTACTGCTGGCAGTCGCTGGGGTGTTGTAATGTCCAGGAATGCTGGGTATTCTGACCAGGTTGTGGAGCTTGACTTTCTATATCCAAGCGAAGGAATACACCGACGATGGGAAAATGGCTACCGGATAACATCCATGGCTGCTACTGCTGATCAGGCAGCTTTTATACTGAGCATACCAAAACGCAAGCTGCTTGACGAAACTCAAGAGACTCTGCGCACCTCTGCCTTCCCTAGCACCCACGTAAAGGAAAAATGGTCCAAGAATCTCTATATTGCATCAATTTGTTACGGGCGGACTGTGTGCTAG 2118 0.4589 MPELRSGARRSKRLGDLQPAPLPVDQGENCAQPAPTRARRRVGGGRGRGNATAVAKGPSPAVPTRRTAAGRGRGVRLINLDPEPCEVLPDQVGLGAPEPLRVEAAANNKIVMEGGSADKVVGAEEEATTTPIPERVQVGTSPMYKIERKLGKGGFGQVYVGRRVSGGSDRTGPDAIEVALKFEHRNSKGCNYGPPYEWQVYNTLNGCYGIPWVHYKGRQGDFYILVMDMLGPSLWDVWNSLSQSMSPNMVACIAVEAISILEKLHMKGFVHGDVKPENFLLGQPGTADEKKLYLIDLGLASRWKDASSGQHVDYDQRPDIFRGTIRYASVHAHLGRTGSRRDDLESLAYTLIFLIKGRLPWQGYQGDNKSFLVCKKKMSTSPELMCCLCPAPFKQFLEAVTNMRFDEEPNYSKLISFFESLIEPCVPMRPIRIDGALKVGQKRGRMLINLEEDEQPKKKVRMGSPATQWISVYNARRPMKQRYHYNVADTRLRQHVDKGNEDGLYISSVASSSNLWALIMDAGTGFSSQVYELSPVFLHKDWIMEQWEKNYYISSIAGATNGSSLVVMSKGTPYTQQSYKVSESFPFKWINKKWKEGFHVTSMTTAGSRWGVVMSRNAGYSDQVVELDFLYPSEGIHRRWENGYRITSMAATADQAAFILSIPKRKLLDETQETLRTSAFPSTHVKEKWSKNLYIASICYGRTVC 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5717g00010 705 ProSitePatterns Protein kinases ATP-binding region signature. 150 181 IPR017441 GO:0005524
Pral5717g00010 705 ProSiteProfiles Protein kinase domain profile. 144 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5717g00010 705 CDD STKc_CK1 143 418 - -
Pral5717g00010 705 SUPERFAMILY Protein kinase-like (PK-like) 144 425 IPR011009 -
Pral5717g00010 705 PANTHER CASEIN KINASE-RELATED 137 669 - -
Pral5717g00010 705 FunFam Casein kinase 1-like protein 116 464 - -
Pral5717g00010 705 Gene3D Transferase(Phosphotransferase) domain 1 113 463 - -
Pral5717g00010 705 ProSitePatterns Serine/Threonine protein kinases active-site signature. 269 281 IPR008271 GO:0004672|GO:0006468
Pral5717g00010 705 Pfam Protein kinase domain 144 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5717g00010 705 MobiDBLite consensus disorder prediction 1 67 - -
Pral5717g00010 705 SMART serkin_6 144 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5717g00010 Pral-Chr5717 53867 60839 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5717g00010 261 418 MAP Kinase Kinase Kinase AT5G50180 23.750 3.28e-07 51.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Pral5717g00010 Pkinase 3.2e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5717g00010 - - gmx:100801967 1321.22