Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5716g00003 ATGCCCCCCGCCTCCGAGGTCATCTGTCTCTTCTCACTTTTCTTCTCCCTCCAACTCCCTCTCACTCTCTCTTCCTCCGCCTCTCGCCGGATCCTCCATCAGCCATTCTTCCCCAAGCATTCTGTCCCTCCTGACTCTTCGCCGCAATCCCAACCCAGCACGATTCCCTTTTCGTCTTCTTCATCATCCTCTCCAACTCCGAGTCCAACACACAGGACTTTTTTCCCTTCTTACCATTCCCCACCAACCCCTGCTTCTCCCTCTGCTCTCTCCACATTTCCTGCCAACATCTCCTCCCTGCTCTTCCCCCAACCCTCTTCCTCCCACCGCCACCCTGCCCTTGCCATTGCTGTCTCCCTGCTCTCCGCAGCTCTTGTCGCCCTTCTTGTCTTCTTCATTTACTACCGTAAACGCACCACTCCTGACAAGGTTTCACGATCTAACAGTCTACGATTATGCCCTCCAAACACTCTTACTTCCGATGGTATTGGTAGTCATAAGCCTCGCTCAAAATCCTGCACCAGCGCGGGCACCAGCTCCGAGTTCCTCTATCTGGGCACTGTGGTAAATTCACGAGAAGCTTGTGGTCGGCTGAGTATGGGCCCTTGTGCTGCACCATATCAAAGACTGGGGTCGCCCGATCTCAAACCGCTTCCGCCATTGCCGCCCCACAGAAACAGAGGGACTGGCGAAGATGAGGAAGAAGAGGAGTTCTTCTCTCCAAGAAGGTCTTCAGGCCGCAGACTGAGTCCAGTGCGTACTGGGTCAGGGAGAGTGCTCCGGTTGGGAATGGATAGACTTGGGATTGGGAGTAGAAGCTTCAATTCAACAACACCCCGCGCTTGCTCAAATTCTGCATCGGCCACTTCTTCCCCTTGTTTGAATTTGAGTCCCAGGCACTCTTCGGAGCCTCAGCCCCCCATGAGATCCTCCTCACCGTCTTCACCGGAGGTTAGTTGGAATTTTCTAGTGTCAGAACAGAGGAAGAATTCTGAGGCCAGAAATGAGATAAATGTTCCAATCGAGAAGCCCCCATCTCCCCCGCCACTTCCGCCTCCACGCTTTTGGGAACGATCTCCAAATAACAATGAGGATACTCGAAAGCCAAGGTTGAAACCTTTGCACTGGGATAAGGTTAGGGCCTGCTCGGATCGGGCCATGGTTTGGGATCAGTTAAAACCGGGTTCTTTCCAATTGAACGAGGAAATGATAGAGACGCTTTTTATGGTGAATAATACCGCAAATTTCGCTATCAGAGATAATGCTCGGCGTCAAATTGTTGCTTCTCCCCCCTTGGAATACAAGGTACTTGACCCTAAGAAGTCTCACAACATCGCCATTTTGCTCAGGGCACTCAATGTGACTATGGATGAAGTATGCGAGGCCCTCAAAGAAGGCAATTGGGATATGCTGGGAACAGAACTTTTAGAAAGTTTGTTAAAGATGGCTCCAACCAAAGATGAAGAATGTAAGCTGAAGGAGTTCAAAGATGAATCAGCCTTCAAGCTTGGTCCAGCTGAGAAATTTCTTAAAATCGTTCTTGATATTCCTTTTGCATTTAAGAGAGTTGACGCAATGCTTTACATTGCTAACTTTGATTCAGAATCAGAATACCTTAGGAAGTCCTTTGAGACTTTGGAGGTGGCCTGTGAGGAACTAAGGAATAACAGATTGTTTTTGAAGCTCCTTGAAGCCGTGCTGAGAACTGGAAATCGTATGAATGTTGGCACGAATCGTGGTGATGCGCATGCATTCAAGCTGGACACGCTTCTGAAGCTAGTTGATATTAAAGGGGCTGATGGAAAGACTACTCTGTTGCATTTTGTTGTGCAGGAAATGGTCAGAACTGAAGGTTCTCGAATATCCTGTGCTACTGATCATCACCAAACTGCTGAAAAGATCCAGCAGTCTACATTCCAGGATGAAGTTGAATTTAGGAAACTTGGACTCCAAGTTGTTTCAGGTCTGAGTGGGGAGCTCAGCAATGTACAAAAAGCAGCTACAATGGATTCAGAGATGCTTAGCGATGATGTCTCCAAGCTTGCCAGAGGGATTGCAGAAGTTGCAGAAGTTGAAAAATTGAATGGAGAATCACCATTGAGAGAGAATAGTGAAAAATTTTCGGAGGCAATGAAACGTTTCTTGAAGAAGGGAGAGAAGGAAATTGTTTTGATTCAGGCACAAGAGAAGAATGCTCTCTCTTCAGTGAAGAAGCTAACGGAGTATTTCCATGGAAATTCTTCCAAGGAAGAAGCTCATCCGTTTAGGATTTTTATGATCGTGAGGGATTTCCTTTCAATACTTGATCGTGTGTGCAAGGAAGTTGGGAAAATAAACGACAGAACTTTGGTTGGTTTCCGTCAATACTCAGAGCCTTCAAATCCCATCCTGCTACCAATGTTCCATGAGATTGTTGGTTCCTTGGATGATGAAACCTCCTCTCGCTCATCATAG 2454 0.4751 MPPASEVICLFSLFFSLQLPLTLSSSASRRILHQPFFPKHSVPPDSSPQSQPSTIPFSSSSSSSPTPSPTHRTFFPSYHSPPTPASPSALSTFPANISSLLFPQPSSSHRHPALAIAVSLLSAALVALLVFFIYYRKRTTPDKVSRSNSLRLCPPNTLTSDGIGSHKPRSKSCTSAGTSSEFLYLGTVVNSREACGRLSMGPCAAPYQRLGSPDLKPLPPLPPHRNRGTGEDEEEEEFFSPRRSSGRRLSPVRTGSGRVLRLGMDRLGIGSRSFNSTTPRACSNSASATSSPCLNLSPRHSSEPQPPMRSSSPSSPEVSWNFLVSEQRKNSEARNEINVPIEKPPSPPPLPPPRFWERSPNNNEDTRKPRLKPLHWDKVRACSDRAMVWDQLKPGSFQLNEEMIETLFMVNNTANFAIRDNARRQIVASPPLEYKVLDPKKSHNIAILLRALNVTMDEVCEALKEGNWDMLGTELLESLLKMAPTKDEECKLKEFKDESAFKLGPAEKFLKIVLDIPFAFKRVDAMLYIANFDSESEYLRKSFETLEVACEELRNNRLFLKLLEAVLRTGNRMNVGTNRGDAHAFKLDTLLKLVDIKGADGKTTLLHFVVQEMVRTEGSRISCATDHHQTAEKIQQSTFQDEVEFRKLGLQVVSGLSGELSNVQKAATMDSEMLSDDVSKLARGIAEVAEVEKLNGESPLRENSEKFSEAMKRFLKKGEKEIVLIQAQEKNALSSVKKLTEYFHGNSSKEEAHPFRIFMIVRDFLSILDRVCKEVGKINDRTLVGFRQYSEPSNPILLPMFHEIVGSLDDETSSRSS 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5716g00003 817 MobiDBLite consensus disorder prediction 270 328 - -
Pral5716g00003 817 MobiDBLite consensus disorder prediction 341 356 - -
Pral5716g00003 817 Gene3D Formin, FH2 domain 357 778 IPR042201 -
Pral5716g00003 817 MobiDBLite consensus disorder prediction 269 369 - -
Pral5716g00003 817 MobiDBLite consensus disorder prediction 226 243 - -
Pral5716g00003 817 MobiDBLite consensus disorder prediction 43 89 - -
Pral5716g00003 817 ProSiteProfiles Formin homology-2 (FH2) domain profile. 361 794 IPR015425 -
Pral5716g00003 817 PANTHER FORMIN-RELATED 11 801 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Pral5716g00003 817 MobiDBLite consensus disorder prediction 40 89 - -
Pral5716g00003 817 Pfam Formin Homology 2 Domain 363 768 IPR015425 -
Pral5716g00003 817 SMART it6_source 361 783 IPR015425 -
Pral5716g00003 817 MobiDBLite consensus disorder prediction 211 257 - -
Pral5716g00003 817 SUPERFAMILY Formin homology 2 domain (FH2 domain) 344 779 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5716g00003 Pral-Chr5716 14559 18977 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5716g00003 89 814 FH2 protein (formin) Gene Family AT2G43800 48.383 0.0 627
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5716g00003 - - qsa:O6P43_000015 790.03