Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5716g00002 ATGCCCCCCGCCTCCGAGGTCATCTGTCTCTTCTCACTTTTCTTCTCCCTCCAACTCCCTCTCACTCTCTCTTCCTCCGCCTCTCGCCGGATCCTCCATCAGCCATTCTTCCCCAAGCATTCTGTCCCTCCTGACTCTTCGCCGCAATCCCAACCCAGCACGATTCCCTTTTCGTCTTCTTCATCATCCTCTCCAACTCCGAGTCCAACACACAGGACTTTTTTCCCTTCTTACCATTCCCCACCAACCCCTGCTTCTCCCTCTGCTCTCTCCACATTTCCTGCCAACATCTCCTCCCTGCTCTTCCCCCAACCCTCTTCCTCCCACCGCCACCCTGCCCTTGCCATTGCTGTCTCCCTGCTCTCCGCAGCTCTTGTCGCCCTTCTTGTCTTCTTCATTTACTACCGTAAACGCACCACTCCTGACAAGGTTTCACGATCTAACAGTCTACGATTATGCCCTCCAAACACTCTTACTTCCGATGGTATTGGTAGTCATAAGCCTCGCTCAAAATCCTGCACCAGCGCGGGCACCAGCTCCGAGTTCCTCTATCTGGGCACTGTGGTAAATTCACGAGAAGCTTGTGGTCGGCTGAGTATGGGCCCTTGTGCTGCACCATATCAAAGACTGGGGTCGCCCGATCTCAAACCGCTTCCGCCATTGCCGCCCCACAGAAACAGAGGGACTGGCGAAGATGAGGAAGAAGAGGAGTTCTTCTCTCCAAGAAGGTCTTCAGGCCGCAGACTGAGTCCAGTGCGTACTGGGTCAGGGAGAGTGCTCCGGTTGGGAATGGATAGACTTGGGATTGGGAGTAGAAGCTTCAATTCAACAACACCCCGCGCTTGCTCAAATTCTGCATCGGCCACTTCTTCCCCTTGTTTGAATTTGAGTCCCAGGCACTCTTCGGAGCCTCAGCCCCCCATGAGATCCTCCTCACCGTCTTCACCGGAGGTTAGTTGGAATTTTCTAGTGTCAGAACAGAGGAAGAATTCTGAGGCCAGAAATGAGATAAATGTTCCAATCGAGAAGCCCCCATCTCCCCCGCCACTTCCGCCTCCACGCTTTTGGGAACGATCTCCAAATAACAATGAGGATACTCGAAAGCCAAGGTTGAAACCTTTGCACTGGGATAAGGTTAGGGCCTGCTCGGATCGGGCCATGGTTTGGGATCAGTTAAAACCGGGTTCTTTCCAATTGAACGAGGAAATGATAGAGACGCTTTTTATGGTGAATAATACCGCAAATTTCGCTATCAGAGATAATGCTCGGCGTCAAATTGTTGCTTCTCCCCCCTTGGAATACAAGGTACTTGACCCTAAGAAGTCTCACAACATCGCCATTTTGCTCAGGGCACTCAATGTGACTATGGATGAAGTATGCGAGGCCCTCAAAGAAGTGATATGTTACAGCTTCCTTTTCTTGATAATAGGCAATTGGGATATGCTGGGAACAGAACTTTTAGAAAGTTTGTTAAAGATGGCTCCAACCAAAGATGAAGAATGTAAGCTGAAGGAGTTCAAAGATGAATCAGCCTTCAAGCTTGGTCCAGCTGAGAAATTTCTTAAAATCGTTCTTGATATTCCTTTTGCATTTAAGAGAGTTGACGCAATGCTTTACATTGCTAACTTTGATTCAGAATCAGAATACCTTAGGAAGTCCTTTGAGACTTTGGAGGTGGCCTGTGAGGAACTAAGGAATAACAGATTGTTTTTGAAGCTCCTTGAAGCCGTGCTGAGAACTGGAAATCGTATGAATGTTGGCACGAATCGTGGTGATGCGCATGCATTCAAGCTGGACACGCTTCTGAAGCTAGTTGATATTAAAGGGGCTGATGGAAAGACTACTCTGTTGCATTTTGTTGTGCAGGAAATGGTCAGAACTGAAGGTTCTCGAATATCCTGTGCTACTGATCATCACCAAACTGCTGAAAAGATCCAGCAGTCTACATTCCAGGATGAAGTTGAATTTAGGAAACTTGGACTCCAAGTTGTTTCAGGTCTGAGTGGGGAGCTCAGCAATGTACAAAAAGCAGCTACAATGGATTCAGAGATGCTTAGCGATGATGTCTCCAAGCTTGCCAGAGGGATTGCAGAAGTTGCAGAAGTTGAAAAATTGAATGGAGAATCACCATTGAGAGAGAATAGTGAAAAATTTTCGGAGGCAATGAAACGTTTCTTGAAGAAGGGAGAGAAGGAAATTGTTTTGATTCAGGCACAAGAGAAGAATGCTCTCTCTTCAGTGAAGAAGCTAACGGAGTATTTCCATGGAAATTCTTCCAAGGAAGAAGCTCATCCGTTTAGGATTTTTATGATCGTGAGGGATTTCCTTTCAATACTTGATCGTGTGTGCAAGGAAGTTGGGAAAATAAACGACAGAACTTTGGTTGGTTTCCGTCAATACTCAGAGCCTTCAAATCCCATCCTGCTACCAATGTTCCATGAGATTGTTGGTTCCTTGGATGATGAAACCTCCTCTCGCTCATCATAG 2487 0.4729 MPPASEVICLFSLFFSLQLPLTLSSSASRRILHQPFFPKHSVPPDSSPQSQPSTIPFSSSSSSSPTPSPTHRTFFPSYHSPPTPASPSALSTFPANISSLLFPQPSSSHRHPALAIAVSLLSAALVALLVFFIYYRKRTTPDKVSRSNSLRLCPPNTLTSDGIGSHKPRSKSCTSAGTSSEFLYLGTVVNSREACGRLSMGPCAAPYQRLGSPDLKPLPPLPPHRNRGTGEDEEEEEFFSPRRSSGRRLSPVRTGSGRVLRLGMDRLGIGSRSFNSTTPRACSNSASATSSPCLNLSPRHSSEPQPPMRSSSPSSPEVSWNFLVSEQRKNSEARNEINVPIEKPPSPPPLPPPRFWERSPNNNEDTRKPRLKPLHWDKVRACSDRAMVWDQLKPGSFQLNEEMIETLFMVNNTANFAIRDNARRQIVASPPLEYKVLDPKKSHNIAILLRALNVTMDEVCEALKEVICYSFLFLIIGNWDMLGTELLESLLKMAPTKDEECKLKEFKDESAFKLGPAEKFLKIVLDIPFAFKRVDAMLYIANFDSESEYLRKSFETLEVACEELRNNRLFLKLLEAVLRTGNRMNVGTNRGDAHAFKLDTLLKLVDIKGADGKTTLLHFVVQEMVRTEGSRISCATDHHQTAEKIQQSTFQDEVEFRKLGLQVVSGLSGELSNVQKAATMDSEMLSDDVSKLARGIAEVAEVEKLNGESPLRENSEKFSEAMKRFLKKGEKEIVLIQAQEKNALSSVKKLTEYFHGNSSKEEAHPFRIFMIVRDFLSILDRVCKEVGKINDRTLVGFRQYSEPSNPILLPMFHEIVGSLDDETSSRSS 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5716g00002 828 MobiDBLite consensus disorder prediction 270 328 - -
Pral5716g00002 828 SMART it6_source 361 794 IPR015425 -
Pral5716g00002 828 MobiDBLite consensus disorder prediction 341 356 - -
Pral5716g00002 828 MobiDBLite consensus disorder prediction 269 369 - -
Pral5716g00002 828 Pfam Formin Homology 2 Domain 363 779 IPR015425 -
Pral5716g00002 828 MobiDBLite consensus disorder prediction 226 243 - -
Pral5716g00002 828 Gene3D Formin, FH2 domain 368 795 IPR042201 -
Pral5716g00002 828 ProSiteProfiles Formin homology-2 (FH2) domain profile. 361 805 IPR015425 -
Pral5716g00002 828 MobiDBLite consensus disorder prediction 43 89 - -
Pral5716g00002 828 SUPERFAMILY Formin homology 2 domain (FH2 domain) 344 790 - -
Pral5716g00002 828 MobiDBLite consensus disorder prediction 40 89 - -
Pral5716g00002 828 PANTHER FORMIN-RELATED 11 812 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Pral5716g00002 828 MobiDBLite consensus disorder prediction 211 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5716g00002 Pral-Chr5716 14557 18977 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5716g00002 89 825 FH2 protein (formin) Gene Family AT2G43800 47.730 0.0 618
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5716g00002 - - qsa:O6P43_000015 781.556