Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5715g00052 ATGGGAAAGAAGGGAAGTTGGTTTTCCGCAATCAAGAGAGTTTTCAGTCACCACTCCAAGGAAAAGGCAGTCAATGATTCTGAACAGAAAAACACAAAAGAAAAGAAGAAGAAAGGTCTTGGAAAACTAAGGCGTGGAGAGACAAATTCATTCATTCCCCTCTTCAGGGAGCCAAGCAGTATTGAAAAAATCTTTGGGGACTTTGAAAGAGAGCAGCAATTAGTAACTTTCAGGCCTGACACGCCTCCTGAGCTACCCAAAACACCACCTTTTGTGCCTCCCAGAGCTGCTTCTCCTAGGGCTCCTTCGCCAAAGACTGCTTCTCCAAGGGCTCCTTCTCCAAGGGTTGCTTCTCCGAGAGCAGCATCTCCTAGGAGGATTGTTCATCACCATAGACCAGAACCAAAGCTAAGGAACCACCATGCCTCAGCAACTAAGATCCAGGCTGCGTATAGAGGTTATATGGCTAGGAGGAGTTTTAGGGCTCTGAAGGGTCTGGTGAGGCTTCAAGGAGTGGTAAGAGGACAGAATGTGAAGAGGCAGACGATGAATGCCATGAAATACATGCAATTGTTGGTGCGGGTTCAATCTCAGATTCAGTCCCGGAGGATTCAGATGTTGGAAAACCAGGCACGATATCAAGCTGAGTACAAGAATGATAAAGAAGTGGCAAGTAACTTGGGCAAGTTGACTTTAGGCCATGGATCTGAGGCAGGTAACCATGAAGATTGGGATGACAGCTTACTGACAAAAGAGGAAATAGAGGCAAGGTTGCAGAGGAAGGTGGAAGCAATCATCAAAAGAGAAAGGGCAATGGCATATGCGTACTCCCATCAGTTGTGGAAAGCCACTCCTACATCAACCCATACACCGGGGTCAGAGATGCGATCTGGGGGATTTCCATGGTGGTGGAACTGGTTGGAAAGGCAGCTGCCCTCAGCAAACCCTCAAGGAGGCCAAGTCTTGAAGAATTTTCAATTTACACCTCCCAGACCATATTCTGAACAGAAGACTAGTCCACAACCTGCCTCAAGCACCCATAAGCAGCAGCGCTATGGGTTTGATAATATGGATGCAGCCACACCAAAATCCACTAAATCAGCTGTAGTATCATCCGCAAAACCAGCAAGAACCCCGCAAGGAAACAGCTCAAGCTTGCCTAAGTATTCGAGAACAAGGGTGGGGGGAACTGATTCACCTTTTGATGTGCCACTCAAGGATGATGATAGCCTCACAAGCTGCCCACCATTTTCAGTACCGAACTACATGGCTCCAACCCTATCTGCCAAGGCCAAAGTGCGTGCTAGTAGTAATGGAAGAGAAAGTTTTCCTGGGACTCCAAACTCTGAATCAAAGAGGCGGCTTTCATTTCCTCTTTCGCAAGGAATTGGGTCCTTCAAATGGACAAAAGGGTCCTTGTTCTCAAGCAAGGATCCTAGACCTCAAAGGATGTTAGATAAGAACCAGTCACTTCAATCTCTAGGAAACTTGAGTGTGGATTCAACCGTGTCTTTACCCGCAGGCGTTGGAAGAAAGCCGTTTAACAGATTTGTGTGA 1557 0.4701 MGKKGSWFSAIKRVFSHHSKEKAVNDSEQKNTKEKKKKGLGKLRRGETNSFIPLFREPSSIEKIFGDFEREQQLVTFRPDTPPELPKTPPFVPPRAASPRAPSPKTASPRAPSPRVASPRAASPRRIVHHHRPEPKLRNHHASATKIQAAYRGYMARRSFRALKGLVRLQGVVRGQNVKRQTMNAMKYMQLLVRVQSQIQSRRIQMLENQARYQAEYKNDKEVASNLGKLTLGHGSEAGNHEDWDDSLLTKEEIEARLQRKVEAIIKRERAMAYAYSHQLWKATPTSTHTPGSEMRSGGFPWWWNWLERQLPSANPQGGQVLKNFQFTPPRPYSEQKTSPQPASSTHKQQRYGFDNMDAATPKSTKSAVVSSAKPARTPQGNSSSLPKYSRTRVGGTDSPFDVPLKDDDSLTSCPPFSVPNYMAPTLSAKAKVRASSNGRESFPGTPNSESKRRLSFPLSQGIGSFKWTKGSLFSSKDPRPQRMLDKNQSLQSLGNLSVDSTVSLPAGVGRKPFNRFV 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5715g00052 518 SMART iq_5 139 161 IPR000048 GO:0005515
Pral5715g00052 518 MobiDBLite consensus disorder prediction 432 454 - -
Pral5715g00052 518 MobiDBLite consensus disorder prediction 82 109 - -
Pral5715g00052 518 Pfam Protein of unknown function (DUF4005) 378 465 IPR025064 -
Pral5715g00052 518 MobiDBLite consensus disorder prediction 17 35 - -
Pral5715g00052 518 MobiDBLite consensus disorder prediction 76 142 - -
Pral5715g00052 518 Gene3D - 138 205 - -
Pral5715g00052 518 ProSiteProfiles IQ motif profile. 140 168 IPR000048 GO:0005515
Pral5715g00052 518 Pfam IQ calmodulin-binding motif 141 161 IPR000048 GO:0005515
Pral5715g00052 518 MobiDBLite consensus disorder prediction 315 352 - -
Pral5715g00052 518 PANTHER IQ-DOMAIN 5-RELATED 1 460 - -
Pral5715g00052 518 MobiDBLite consensus disorder prediction 360 392 - -
Pral5715g00052 518 MobiDBLite consensus disorder prediction 17 51 - -
Pral5715g00052 518 MobiDBLite consensus disorder prediction 315 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5715g00052 Pral-Chr5715 185580 191148 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5715g00052 1 517 IQD Protein Family AT3G59690 53.047 1.89e-164 474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5715g00052 - - qsa:O6P43_000027 719.153