Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5715g00049 ATGGGAAAGAAGGGAAGTTGGTTTTCCGCAATCAAGAGAGTTTTCAGTCACCACTCCAAGGAAAAGGCAGTCAATCAGGATTCTGAACAGAAAAACACAAAAGAAAAGAAGAAGAAAGGTCTTGGAAAACTAAGGCGTGGAGAGACAAATTCATTCATTCCCCTCTTCAGGGAGCCAAGCAGTATTGAAAAAATCTTTGGGGACTTTGAAAGAGAGCAGCAATTAGTAACTTTCAGGCCTGACACGCCTCCTGAGCTACCCAAAACACCACCTTTTGTGCCTCCCAGAGCTGCTTCTCCTAGGGCTCCTTCGCCAAAGACTGCTTCTCCAAGGGCTCCTTCTCCAAGGGTTGCTTCTCCGAGAGCAGCATCTCCTAGGAGGATTGTTCATCACCATAGACCAGAACCAAAGCTAAGGAACCACCATGCCTCAGCAACTAAGATCCAGGCTGCGTATAGAGGTTATATGGCTAGGAGGAGTTTTAGGGCTCTGAAGGGTCTGGTGAGGCTTCAAGGAGTGGTAAGAGGACAGAATGTGAAGAGGCAGACGATGAATGCCATGAAATACATGCAATTGTTGGTGCGGGTTCAATCTCAGATTCAGTCCCGGAGGATTCAGATGTTGGAAAACCAGGCACGATATCAAGCTGAGTACAAGAATGATAAAGAAGTGGCAAGTAACTTGGGCAAGTTGACTTTAGGCCATGGATCTGAGGCAGGTAACCATGAAGATTGGGATGACAGCTTACTGACAAAAGAGGAAATAGAGGCAAGGTTGCAGAGGAAGGTGGAAGCAATCATCAAAAGAGAAAGGGCAATGGCATATGCGTACTCCCATCAGTTGTGGAAAGCCACTCCTACATCAACCCATACACCGGGGTCAGAGATGCGATCTGGGGGATTTCCATGGTGGTGGAACTGGTTGGAAAGGCAGCTGCCCTCAGCAAACCCTCAAGGAGGCCAAGTCTTGAAGAATTTTCAATTTACACCTCCCAGACCATATTCTGAACAGAAGACTAGTCCACAACCTGCCTCAAGCACCCATAAGCAGCAGCGCTATGGGTTTGATAATATGGATGCAGCCACACCAAAATCCACTAAATCAGCTGTAGTATCATCCGCAAAACCAGCAAGAACCCCGCAAGGAAACAGCTCAAGCTTGCCTAAGTATTCGAGAACAAGGGTGGGGGGAACTGATTCACCTTTTGATGTGCCACTCAAGGATGATGATAGCCTCACAAGCTGCCCACCATTTTCAGTACCGAACTACATGGCTCCAACCCTATCTGCCAAGGCCAAAGTGCGTGCTAGTAGTAATGGAAGAGAAAGTTTTCCTGGGACTCCAAACTCTGAATCAAAGAGGCGGCTTTCATTTCCTCTTTCGCAAGGAATTGGGTCCTTCAAATGGACAAAAGGGTCCTTGTTCTCAAGCAAGGATCCTAGACCTCAAAGGATGTTAGATAAGAACCAGTCACTTCAATCTCTAGGAAACTTGAGTGTGGATTCAACCGTGTCTTTACCCGCAGGCGTTGGAAGAAAGCCGTTTAACAGATTTGTGTGA 1560 0.4705 MGKKGSWFSAIKRVFSHHSKEKAVNQDSEQKNTKEKKKKGLGKLRRGETNSFIPLFREPSSIEKIFGDFEREQQLVTFRPDTPPELPKTPPFVPPRAASPRAPSPKTASPRAPSPRVASPRAASPRRIVHHHRPEPKLRNHHASATKIQAAYRGYMARRSFRALKGLVRLQGVVRGQNVKRQTMNAMKYMQLLVRVQSQIQSRRIQMLENQARYQAEYKNDKEVASNLGKLTLGHGSEAGNHEDWDDSLLTKEEIEARLQRKVEAIIKRERAMAYAYSHQLWKATPTSTHTPGSEMRSGGFPWWWNWLERQLPSANPQGGQVLKNFQFTPPRPYSEQKTSPQPASSTHKQQRYGFDNMDAATPKSTKSAVVSSAKPARTPQGNSSSLPKYSRTRVGGTDSPFDVPLKDDDSLTSCPPFSVPNYMAPTLSAKAKVRASSNGRESFPGTPNSESKRRLSFPLSQGIGSFKWTKGSLFSSKDPRPQRMLDKNQSLQSLGNLSVDSTVSLPAGVGRKPFNRFV 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5715g00049 519 SMART iq_5 140 162 IPR000048 GO:0005515
Pral5715g00049 519 Pfam Protein of unknown function (DUF4005) 379 466 IPR025064 -
Pral5715g00049 519 MobiDBLite consensus disorder prediction 361 393 - -
Pral5715g00049 519 MobiDBLite consensus disorder prediction 316 409 - -
Pral5715g00049 519 MobiDBLite consensus disorder prediction 18 52 - -
Pral5715g00049 519 Pfam IQ calmodulin-binding motif 142 162 IPR000048 GO:0005515
Pral5715g00049 519 MobiDBLite consensus disorder prediction 433 455 - -
Pral5715g00049 519 MobiDBLite consensus disorder prediction 83 110 - -
Pral5715g00049 519 MobiDBLite consensus disorder prediction 18 36 - -
Pral5715g00049 519 PANTHER IQ-DOMAIN 5-RELATED 1 461 - -
Pral5715g00049 519 MobiDBLite consensus disorder prediction 77 143 - -
Pral5715g00049 519 Gene3D - 139 206 - -
Pral5715g00049 519 MobiDBLite consensus disorder prediction 316 353 - -
Pral5715g00049 519 ProSiteProfiles IQ motif profile. 141 169 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5715g00049 Pral-Chr5715 185544 191148 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5715g00049 1 518 IQD Protein Family AT3G59690 52.867 3.09e-164 474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5715g00049 - - qsa:O6P43_000027 714.531