Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5715g00039 ATGACGGCCAGCTCCTTCTGCAATGCTGACTCTGTGTTCTCGAGAGAAGAAGGGGTAGATATTAGAAAGATGATGGAACCAAAGAGGAGCCTCTGCTCTGTGGATCAAAGCAATTATGCCTCTATTGCATCTAAAAGACACAAGGCCGATTTATCCATCTCCACAAAGGAGAGAAAGGAGAAGATTGGTGAACGAATTGTCGCCTTGCAGCAGCTCGTTTCTCCGTTTGGGAAGTCAGATACTGCTTCGGTCCTTTTAGAGGCAACTCACTATATCAGGTTCCTTCATAAACAAGTTAAGGTACTTAGTGCTCCTTATCTGCAATGCTCTCCTACTACCAAAACGCAGGATGTAGAGGCGTGCAACCTGAGGAGCAGAGGATTATGTCTGGTTCCTGTGTCGTATACGATTGGAGTGGCTCAGAGCAATGGCGCAGACATATGGGCCCCCACCAAAAGCACGTCATCGCAGCTTGACTAG 480 0.475 MTASSFCNADSVFSREEGVDIRKMMEPKRSLCSVDQSNYASIASKRHKADLSISTKERKEKIGERIVALQQLVSPFGKSDTASVLLEATHYIRFLHKQVKVLSAPYLQCSPTTKTQDVEACNLRSRGLCLVPVSYTIGVAQSNGADIWAPTKSTSSQLD 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5715g00039 159 Gene3D - 43 116 IPR036638 GO:0046983
Pral5715g00039 159 SMART finulus 52 101 IPR011598 GO:0046983
Pral5715g00039 159 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 39 136 - -
Pral5715g00039 159 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 46 95 IPR011598 GO:0046983
Pral5715g00039 159 FunFam Transcription factor bHLH113 family 45 121 - -
Pral5715g00039 159 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 52 110 IPR036638 GO:0046983
Pral5715g00039 159 CDD bHLH_AtbHLH_like 52 103 IPR045239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5715g00039 Pral-Chr5715 151594 156452 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5715g00039 24 156 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31730 61.940 7.99e-56 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5715g00039 - - pcin:129312787 288.115