Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5715g00004 ATGGATAATGATAAATCCTCTATTTACGGTGGAGGTCTTCCGCCTTCGGGACGTTATTCAGGCTTCTCACCTCCGGGAAGCTCTTTCAACGTGAAACCAGAAGCATCCTCATCATCGTCATCTTTTCCGCCGCTGGTACCCGGTACCAGCTCGGACTCTAGTGGCTTCAGTCATGATATTAGCAGGATGCCTGATAATCCTCCTAGAAACAGGGGTCATAGACGGGCCCATTCTGAGATTCTCACCCTGCCGGATGATCTAAGCTTTGACAGTGACCTTGGTGTAGTTGGAGGTGCTGATGGGCCTTCCTTTTCTGATGAGACTGAGGAAGACTTACTATCGATGTACCTTGATATGGATAAATTTAACTCTTCATCTGCGACATCTGCATTTCAAGTGGGTGAAGCTGCTGCATCAGTTCCAGCGCCAAAATTGGAACCAACAGCAGGAATTGTGGCCTCTCCTGTAGAGAATGCTGGTATTGATGCTAATGAAAGGCCCAGAGTTAGGCACCAACACAGCCAGTCCATGGATGGGTCGACATCCATTAAACCCGAGATCTTAGTATCAGGTTCTGAAGAAGGTTCTGCAGCTGATTCCAAAAAAGCAATGTCAGCTGCCAAGCTTGCGGAACTTGCCTTAGTTGACCCAAAGCGTGCAAAAAGGATATGGGCAAACAGGCAGTCTGCTGCGAGGTCAAAAGAGAGGAAGATGCGCTATATTGCTGAGCTTGAAAGGAAGGTGCAGACCCTTCAAACGGAAGCAACATCTTTGTCTGCACAATTAACTCTCCTGCAGAGAGATACAAATGGGCTGAATGCTGAGAACAGTGAGCTGAAGCTCAGGTTGCAGACTATGGAACAGCAAGTTCACTTGCAAGATGCTTTAAATGACGCGTTGAAAGAGGAAATACAGCATTTGAAACTAGTGACGGGGCAGGCTATGATGAATGGTGGACCTGTGATGAACTTTGCTCCTTTTGGAGGAGGGCAGCAATTTTATCCCAACAATCACGCCATGCACACTCTCTTGGCAACACAACAGTTTCAACAACTCCAGATTCAGTCTCAGAAGCAGCAGCAGCTTCAGCAACATCAGCTGCATCAGCTTCAGCAGCAACAAACGGGGGACTTAAAAATGAGAACAACTACTCGTTCTCCAAGCCCCAAAGATCGAAATTCACCGGCAGCCAAGGATTGTTGA 1203 0.4746 MDNDKSSIYGGGLPPSGRYSGFSPPGSSFNVKPEASSSSSSFPPLVPGTSSDSSGFSHDISRMPDNPPRNRGHRRAHSEILTLPDDLSFDSDLGVVGGADGPSFSDETEEDLLSMYLDMDKFNSSSATSAFQVGEAAASVPAPKLEPTAGIVASPVENAGIDANERPRVRHQHSQSMDGSTSIKPEILVSGSEEGSAADSKKAMSAAKLAELALVDPKRAKRIWANRQSAARSKERKMRYIAELERKVQTLQTEATSLSAQLTLLQRDTNGLNAENSELKLRLQTMEQQVHLQDALNDALKEEIQHLKLVTGQAMMNGGPVMNFAPFGGGQQFYPNNHAMHTLLATQQFQQLQIQSQKQQQLQQHQLHQLQQQQTGDLKMRTTTRSPSPKDRNSPAAKDC 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5715g00004 400 MobiDBLite consensus disorder prediction 1 79 - -
Pral5715g00004 400 MobiDBLite consensus disorder prediction 365 400 - -
Pral5715g00004 400 Coils Coil 234 303 - -
Pral5715g00004 400 CDD bZIP_plant_RF2 219 268 IPR044759 GO:0003700|GO:0006355
Pral5715g00004 400 FunFam probable transcription factor PosF21 217 270 - -
Pral5715g00004 400 MobiDBLite consensus disorder prediction 64 79 - -
Pral5715g00004 400 SMART brlzneu 214 278 IPR004827 GO:0003700|GO:0006355
Pral5715g00004 400 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 216 279 IPR004827 GO:0003700|GO:0006355
Pral5715g00004 400 MobiDBLite consensus disorder prediction 365 391 - -
Pral5715g00004 400 SUPERFAMILY Leucine zipper domain 218 269 IPR046347 GO:0003700|GO:0006355
Pral5715g00004 400 Gene3D - 217 290 - -
Pral5715g00004 400 MobiDBLite consensus disorder prediction 21 60 - -
Pral5715g00004 400 Pfam bZIP transcription factor 218 274 IPR004827 GO:0003700|GO:0006355
Pral5715g00004 400 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 22 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5715g00004 Pral-Chr5715 18461 22080 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5715g00004 18 345 bZIP Transcription Factor Family AT1G06070 73.333 9.77e-169 477
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pral5715g00004 bZIP_1 1.4e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5715g00004 - - pcin:129313665 665.996