Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5714g00041 ATGGGAAGCTGCATATCCACGCCGGGCAAGACATTCCCTCGCAGGAGGTCCAAGGAGAGCGTCAAGTCATGCATACCCAAATCTGGCTCTCACGCGCCGCCGCAGCAAAAAGCCCTCAACGTCGGCCCCATCAACGTCATCGAGGACCCGACCCCCGACAACATCTTTGAGAAGTTCGAGTTCGGCAAGGAACTTGGACGCGGCGAGTTCGGCGTGACACACAGATGCGTGGAGATTGAGACAGGGAAGGCGTTCGCGTGCAAGAAGATCGCCAAGACGAAGCTTCGCACGGAGATTGATATCCAAGATGTGAGGAGAGAGGTGCAGATCATGAGGCATTTGCCAAAGCATCCTAATATCGTGAGCTTCAAGGAAGCTTACGAGGACAAGGATGCCGTGTATCTCATCATGGAGCTTTGTGAAGGAGGCGAGCTTTTTGACAGAATTGTCGCTAAAGGCCATTACACAGAACGTGCCGCGGCTAATGTTATTAAGACAATTCTTGAGATTTGCAAGGTATGCCATGAGCATGGGGTGATACATAGGGACTTGAAGCCCGAAAATTTCTTATTTGGAGATGCAAGTGAGTCTGCTCCGGTGAAGGCAATTGATTTTGGGCTCTCCACCTTCTATGAATCAGGGCAGAGGTTTAATGAAATTGTCGGAAGTCCCTATTACATGGCTCCAGAAGTCTTGAGACGTAACTATGGACCAGAAATCGATGTGTGGAGCGCCGGCGTAATCCTTTATATTTTACTTTGTGGAGTTCCACCCTTTTGGGCAGAATCTGAGGAAGGAATAGCACAGGCGATCATCCGGGGAAACATCGATTTTGAAAGAGATCCTTGGCCTAAGGTTTCAGAAGAAGCAAAAAGCCTAGTTAAAAACATGCTTGATCCAAATCCATACAGCCGATTAACTAGTCAAGAAGTTCTTGAACATCCGTGGATACAGAACAGAGAACAGGGTCCAAATGTTTATCTAGGAGATCATGTACGAATGAGAATCAAGCAATTTTCCTTGATGAACAAGTTCAAGAAGAAAGTTCTTAGAGTGGTGGCAGACAGCCTTCCAACTGAGCAAATAGATCGGATCAAGCAGATGTTCCATATGATGGACAAGGATAAAAATGGAAACTTGTCGTTTGAAGAGCTCAAAGATGGTCTTTCTAGGATTGGACACCCTCTTCCTGACCCTGATGTGCAGATGTTATTGGACGCAGCAGATACAGATGGAAATGGCACGCTGAATTGTGAAGAGTTCATCACTATGAATGTCCATCTGGGGAAGATTGGAAGTGACGAGCATCTCTCCGAAGCTTTTTGTTACTTTGACAAGAACAAGAGTGGATTCGTGGAATTTGATGAATTGAGAGAGGCCTTGTTGGATGATGACTTAGGTCCCTGTAATGATCAGGTGGTCCATGACATCCTATTTGAAGTCGACTTGGATAAGGACGGTCGGATCAGTTTTGAGGAGTTCAAGGCGATGATGACGACAGGACCAGATTGGAAAATGGCATCTCGCCAATATTCTAGAGCAATGCTAAATGCGTTGAGCTTCAAAATGTTCAATAACAAGTCTGTGAAATGCGCCTAA 1599 0.4628 MGSCISTPGKTFPRRRSKESVKSCIPKSGSHAPPQQKALNVGPINVIEDPTPDNIFEKFEFGKELGRGEFGVTHRCVEIETGKAFACKKIAKTKLRTEIDIQDVRREVQIMRHLPKHPNIVSFKEAYEDKDAVYLIMELCEGGELFDRIVAKGHYTERAAANVIKTILEICKVCHEHGVIHRDLKPENFLFGDASESAPVKAIDFGLSTFYESGQRFNEIVGSPYYMAPEVLRRNYGPEIDVWSAGVILYILLCGVPPFWAESEEGIAQAIIRGNIDFERDPWPKVSEEAKSLVKNMLDPNPYSRLTSQEVLEHPWIQNREQGPNVYLGDHVRMRIKQFSLMNKFKKKVLRVVADSLPTEQIDRIKQMFHMMDKDKNGNLSFEELKDGLSRIGHPLPDPDVQMLLDAADTDGNGTLNCEEFITMNVHLGKIGSDEHLSEAFCYFDKNKSGFVEFDELREALLDDDLGPCNDQVVHDILFEVDLDKDGRISFEEFKAMMTTGPDWKMASRQYSRAMLNALSFKMFNNKSVKCA 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5714g00041 532 PANTHER SERINE/THREONINE-PROTEIN KINASE 54 491 - -
Pral5714g00041 532 ProSitePatterns EF-hand calcium-binding domain. 482 494 IPR018247 -
Pral5714g00041 532 FunFam Calcium-dependent protein kinase 7 326 502 - -
Pral5714g00041 532 Gene3D Phosphorylase Kinase; domain 1 61 144 - -
Pral5714g00041 532 CDD STKc_CAMK 58 316 - -
Pral5714g00041 532 FunFam Calcium-dependent protein kinase 1 61 144 - -
Pral5714g00041 532 Pfam EF-hand domain pair 377 424 IPR002048 GO:0005509
Pral5714g00041 532 ProSitePatterns EF-hand calcium-binding domain. 445 457 IPR018247 -
Pral5714g00041 532 ProSiteProfiles Protein kinase domain profile. 59 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5714g00041 532 ProSiteProfiles EF-hand calcium-binding domain profile. 360 395 IPR002048 GO:0005509
Pral5714g00041 532 SMART serkin_6 59 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5714g00041 532 FunFam calcium-dependent protein kinase 13 145 325 - -
Pral5714g00041 532 SUPERFAMILY Protein kinase-like (PK-like) 56 318 IPR011009 -
Pral5714g00041 532 ProSitePatterns EF-hand calcium-binding domain. 373 385 IPR018247 -
Pral5714g00041 532 Gene3D - 327 500 - -
Pral5714g00041 532 Pfam EF-hand domain pair 435 498 IPR002048 GO:0005509
Pral5714g00041 532 ProSiteProfiles EF-hand calcium-binding domain profile. 396 431 IPR002048 GO:0005509
Pral5714g00041 532 ProSiteProfiles EF-hand calcium-binding domain profile. 469 504 IPR002048 GO:0005509
Pral5714g00041 532 ProSitePatterns EF-hand calcium-binding domain. 409 421 IPR018247 -
Pral5714g00041 532 Pfam Protein kinase domain 59 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5714g00041 532 SUPERFAMILY EF-hand 346 512 IPR011992 -
Pral5714g00041 532 Gene3D Transferase(Phosphotransferase) domain 1 145 326 - -
Pral5714g00041 532 ProSitePatterns Protein kinases ATP-binding region signature. 65 88 IPR017441 GO:0005524
Pral5714g00041 532 ProSiteProfiles EF-hand calcium-binding domain profile. 432 467 IPR002048 GO:0005509
Pral5714g00041 532 SMART efh_1 473 501 IPR002048 GO:0005509
Pral5714g00041 532 SMART efh_1 436 464 IPR002048 GO:0005509
Pral5714g00041 532 SMART efh_1 400 428 IPR002048 GO:0005509
Pral5714g00041 532 SMART efh_1 364 392 IPR002048 GO:0005509
Pral5714g00041 532 MobiDBLite consensus disorder prediction 1 35 - -
Pral5714g00041 532 ProSitePatterns Serine/Threonine protein kinases active-site signature. 179 191 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5714g00041 Pral-Chr5714 161979 165885 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5714g00041 1 524 EF-hand Containing Proteins AT2G31500 70.544 0.0 789
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pral5714g00041 Pkinase 7.2e-77 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5714g00041 K13412 - gmx:100801716 839.336