Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5714g00035 ATGGTTGTTATTGAAGTAATCCCCACCATCATCAGATCGTCGTCATCATATAATTTCCAAACTGCCGCCAACACTCTAGTGTCGTCCATGGGAAGCTGCATATCCACGCCGGGCAAGACATTCCCTCGCAGGAGGTCCAAGGAGAGCGTCAAGTCATGCATACCCAAATCTGGCTCTCACGCGCCGCCGCAGCAAAAAGCCCTCAACGTCGGCCCCATCAACGTCATCGAGGACCCGACCCCCGACAACATCTTTGAGAAGTTCGAGTTCGGCAAGGAACTTGGACGCGGCGAGTTCGGCGTGACACACAGATGCGTGGAGATTGAGACAGGGAAGGCGTTCGCGTGCAAGAAGATCGCCAAGACGAAGCTTCGCACGGAGATTGATATCCAAGATGTGAGGAGAGAGGTGCAGATCATGAGGCATTTGCCAAAGCATCCTAATATCGTGAGCTTCAAGGAAGCTTACGAGGACAAGGATGCCGTGTATCTCATCATGGAGCTTTGTGAAGGAGGCGAGCTTTTTGACAGAATTGTCGCTAAAGGCCATTACACAGAACGTGCCGCGGCTAATGTTATTAAGACAATTCTTGAGATTTGCAAGGTATGCCATGAGCATGGGGTGATACATAGGGACTTGAAGCCCGAAAATTTCTTATTTGGAGATGCAAGTGAGTCTGCTCCGGTGAAGGCAATTGATTTTGGGCTCTCCACCTTCTATGAATCAGGGCAGAGGTTTAATGAAATTGTCGGAAGTCCCTATTACATGGCTCCAGAAGTCTTGAGACGTAACTATGGACCAGAAATCGATGTGTGGAGCGCCGGCGTAATCCTTTATATTTTACTTTGTGGAGTTCCACCCTTTTGGGCAGAATCTGAGGAAGGAATAGCACAGGCGATCATCCGGGGAAACATCGATTTTGAAAGAGATCCTTGGCCTAAGGTTTCAGAAGAAGCAAAAAGCCTAGTTAAAAACATGCTTGATCCAAATCCATACAGCCGATTAACTAGTCAAGAAGTTCTTGAACATCCGTGGATACAGAACAGAGAACAGGGTCCAAATGTTTATCTAGGAGATCATGTACGAATGAGAATCAAGCAATTTTCCTTGATGAACAAGTTCAAGAAGAAAGTTCTTAGAGTGGTGGCAGACAGCCTTCCAACTGAGCAAATAGATCGGATCAAGCAGATGTTCCATATGATGGACAAGGATAAAAATGGAAACTTGTCGTTTGAAGAGCTCAAAGATGGTCTTTCTAGGATTGGACACCCTCTTCCTGACCCTGATGTGCAGATGTTATTGGACGCAGCAGATACAGATGGAAATGGCACGCTGAATTGTGAAGAGTTCATCACTATGAATGTCCATCTGGGGAAGATTGGAAGTGACGAGCATCTCTCCGAAGCTTTTTGTTACTTTGACAAGAACAAGAGTGGATTCGTGGAATTTGATGAATTGAGAGAGGCCTTGTTGGATGATGACTTAGGTCCCTGTAATGATCAGGTGGTCCATGACATCCTATTTGAAGTCGACTTGGATAAGGACGGTCGGATCAGTTTTGAGGAGTTCAAGGCGATGATGACGACAGGACCAGATTGGAAAATGGCATCTCGCCAATATTCTAGAGCAATGCTAAATGCGTTGAGCTTCAAAATGTTCAATAACAAGTCTGTGAAATGCGCCTAA 1686 0.4614 MVVIEVIPTIIRSSSSYNFQTAANTLVSSMGSCISTPGKTFPRRRSKESVKSCIPKSGSHAPPQQKALNVGPINVIEDPTPDNIFEKFEFGKELGRGEFGVTHRCVEIETGKAFACKKIAKTKLRTEIDIQDVRREVQIMRHLPKHPNIVSFKEAYEDKDAVYLIMELCEGGELFDRIVAKGHYTERAAANVIKTILEICKVCHEHGVIHRDLKPENFLFGDASESAPVKAIDFGLSTFYESGQRFNEIVGSPYYMAPEVLRRNYGPEIDVWSAGVILYILLCGVPPFWAESEEGIAQAIIRGNIDFERDPWPKVSEEAKSLVKNMLDPNPYSRLTSQEVLEHPWIQNREQGPNVYLGDHVRMRIKQFSLMNKFKKKVLRVVADSLPTEQIDRIKQMFHMMDKDKNGNLSFEELKDGLSRIGHPLPDPDVQMLLDAADTDGNGTLNCEEFITMNVHLGKIGSDEHLSEAFCYFDKNKSGFVEFDELREALLDDDLGPCNDQVVHDILFEVDLDKDGRISFEEFKAMMTTGPDWKMASRQYSRAMLNALSFKMFNNKSVKCA 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5714g00035 561 Gene3D Phosphorylase Kinase; domain 1 90 173 - -
Pral5714g00035 561 CDD STKc_CAMK 87 345 - -
Pral5714g00035 561 SMART efh_1 429 457 IPR002048 GO:0005509
Pral5714g00035 561 SMART efh_1 393 421 IPR002048 GO:0005509
Pral5714g00035 561 SMART efh_1 465 493 IPR002048 GO:0005509
Pral5714g00035 561 SMART efh_1 502 530 IPR002048 GO:0005509
Pral5714g00035 561 ProSiteProfiles EF-hand calcium-binding domain profile. 461 496 IPR002048 GO:0005509
Pral5714g00035 561 ProSitePatterns EF-hand calcium-binding domain. 474 486 IPR018247 -
Pral5714g00035 561 SUPERFAMILY EF-hand 375 541 IPR011992 -
Pral5714g00035 561 ProSiteProfiles EF-hand calcium-binding domain profile. 498 533 IPR002048 GO:0005509
Pral5714g00035 561 ProSitePatterns EF-hand calcium-binding domain. 511 523 IPR018247 -
Pral5714g00035 561 SUPERFAMILY Protein kinase-like (PK-like) 85 347 IPR011009 -
Pral5714g00035 561 ProSiteProfiles EF-hand calcium-binding domain profile. 389 424 IPR002048 GO:0005509
Pral5714g00035 561 Gene3D Transferase(Phosphotransferase) domain 1 174 355 - -
Pral5714g00035 561 ProSiteProfiles Protein kinase domain profile. 88 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5714g00035 561 ProSitePatterns EF-hand calcium-binding domain. 438 450 IPR018247 -
Pral5714g00035 561 FunFam Calcium-dependent protein kinase 1 90 173 - -
Pral5714g00035 561 Pfam EF-hand domain pair 406 453 IPR002048 GO:0005509
Pral5714g00035 561 ProSitePatterns Protein kinases ATP-binding region signature. 94 117 IPR017441 GO:0005524
Pral5714g00035 561 PANTHER SERINE/THREONINE-PROTEIN KINASE 83 520 - -
Pral5714g00035 561 ProSitePatterns EF-hand calcium-binding domain. 402 414 IPR018247 -
Pral5714g00035 561 Gene3D - 356 529 - -
Pral5714g00035 561 FunFam calcium-dependent protein kinase 13 174 354 - -
Pral5714g00035 561 Pfam Protein kinase domain 88 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5714g00035 561 Pfam EF-hand domain pair 464 527 IPR002048 GO:0005509
Pral5714g00035 561 ProSitePatterns Serine/Threonine protein kinases active-site signature. 208 220 IPR008271 GO:0004672|GO:0006468
Pral5714g00035 561 SMART serkin_6 88 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5714g00035 561 ProSiteProfiles EF-hand calcium-binding domain profile. 425 460 IPR002048 GO:0005509
Pral5714g00035 561 FunFam Calcium-dependent protein kinase 7 355 531 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5714g00035 Pral-Chr5714 161979 165887 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5714g00035 30 553 EF-hand Containing Proteins AT2G31500 70.544 0.0 791
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pral5714g00035 Pkinase 8.2e-77 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5714g00035 K13412 - gmx:100801716 839.336