Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5714g00003 ATGTGCCTCAAAACGCCGGTCCTTCCTCAGTCCACCAGAGACATACATATGGAATCTTCAACCCCACCATCGCCGGAGCTCCCCCTCAACAACCTCAGAGCACTCAAAGTCCTCGGTAAGGGTGGCATGGGCACTGTCTTCCTCGTCCACGACACCTTATCCGATCCCTCTGCCCATTCCCCTTTCGCTCTCAAGGTCCTCGACAAATCCTCCGTTGATTCCCGCCACACTACCCTCGACGCCGACCGCCGTGCCCGCTGGGAAATCCAGGTCCTCACTCGTTTGTCCCACCCCTTCCTCCCTTCCCTTCTCGGAACCATCGAGTCTGACCAGCTTCTCGGTTGGGCTGTTCCTTATTGCCCTGGTGGTGACCTTCACGTCCTCCTTCACCGCCAGAGTGATCGGGTTTTCTCCCCCGCTGTCATTCGCTTCTATTTAGCAGAGATCCTTTGCGCCCTCGACCATCTTCACAGCATTGGCATCGCCTACCGCGATTTGAAGCCCGAGAACGTCCTCATTCAGCAGTCCGGCCACGTCACTCTTACCGACTTCGACCTCTCTCATAAGCTCAAACCCAAATCCATCAGAACGGTGATTTCCTCAACACCGGCTCAAGACAATTTCCCCGAAATTCGCCGGAAAAATCGACGCAATTTGACGCGATGGTTCCCCACCGCACCGGAGAACAAGAAGGGGTTGAAGAAGGCGAAGTCGGCCCGAGTCAGCCCGGTGAGTCGCCGGAAACCGAGTTTCTCCAGTGGTGAGAAGTCTAACTCGTTTGTGGGCACGGAAGAGTACGTATCACCGGAGGTAGTGCGCGGCGACGGTCACGAGTTTGCCGTTGATTGGTGGGCCTTGGGAATATTAGCTTACGAGATGTTGTACGGTACGACGCCGTTCAAAGGGAGTAACCGGAAGGAAACTTTTCGGAATGTTCTGTTGAAAGCACCGGAATTCATCGGAAAGCGGACGGTACTAACGGATTTGATCGAGCGGTTACTGGAGAAGGATCCCACAAGGCGGTTGGGTTACGTGCGAGGCGCGTGCGAGATCAGGGAGCACGAGTTCTTCAGAGGGGTAAAGTGGGACCTACTGACAGAGTTGGTAAGGCCGCCGTTCATTCCGCCGAGAGAGGACGGCGGCGACTTCACTGCCAGCGGTACGGACATAACTGATTACTTCCGTAGCCAGAAATCGCCGCCCTCGTTCTCTGCATCGCCGTCTTCTGAGTATCAGAGGAATATCTCGTACGGAGAATTTTGA 1263 0.5534 MCLKTPVLPQSTRDIHMESSTPPSPELPLNNLRALKVLGKGGMGTVFLVHDTLSDPSAHSPFALKVLDKSSVDSRHTTLDADRRARWEIQVLTRLSHPFLPSLLGTIESDQLLGWAVPYCPGGDLHVLLHRQSDRVFSPAVIRFYLAEILCALDHLHSIGIAYRDLKPENVLIQQSGHVTLTDFDLSHKLKPKSIRTVISSTPAQDNFPEIRRKNRRNLTRWFPTAPENKKGLKKAKSARVSPVSRRKPSFSSGEKSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILAYEMLYGTTPFKGSNRKETFRNVLLKAPEFIGKRTVLTDLIERLLEKDPTRRLGYVRGACEIREHEFFRGVKWDLLTELVRPPFIPPREDGGDFTASGTDITDYFRSQKSPPSFSASPSSEYQRNISYGEF 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5714g00003 420 MobiDBLite consensus disorder prediction 219 258 - -
Pral5714g00003 420 FunFam Serine/threonine-protein kinase UCNL 32 123 - -
Pral5714g00003 420 PANTHER FLIPPASE KINASE 1-RELATED 26 377 - -
Pral5714g00003 420 SMART serkin_6 32 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5714g00003 420 Gene3D Phosphorylase Kinase; domain 1 32 123 - -
Pral5714g00003 420 FunFam Serine/threonine-protein kinase OXI1 255 376 - -
Pral5714g00003 420 ProSiteProfiles Protein kinase domain profile. 32 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5714g00003 420 FunFam Serine/threonine-protein kinase OXI1 124 192 - -
Pral5714g00003 420 SUPERFAMILY Protein kinase-like (PK-like) 29 409 IPR011009 -
Pral5714g00003 420 Gene3D Transferase(Phosphotransferase) domain 1 254 376 - -
Pral5714g00003 420 ProSiteProfiles AGC-kinase C-terminal domain profile. 358 420 IPR000961 GO:0004674|GO:0005524|GO:0006468
Pral5714g00003 420 MobiDBLite consensus disorder prediction 394 420 - -
Pral5714g00003 420 Gene3D Transferase(Phosphotransferase) domain 1 124 203 - -
Pral5714g00003 420 ProSitePatterns Serine/Threonine protein kinases active-site signature. 161 173 IPR008271 GO:0004672|GO:0006468
Pral5714g00003 420 Pfam Protein kinase domain 35 199 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5714g00003 420 Pfam Protein kinase domain 252 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5714g00003 420 ProSitePatterns Protein kinases ATP-binding region signature. 38 65 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5714g00003 Pral-Chr5714 22037 23482 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5714g00003 27 408 AGC Kinase Gene Family AT3G20830 62.437 4.09e-163 463
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Pral5714g00003 Pkinase 2.6e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5714g00003 - - qsa:O6P43_000123 604.749