Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5713g00002 ATGGACCATGACAAGACTGGATGTCAAGCTCCTCCGGAAGGTCCTATATTGTGCATCAATAACTGTGGATTTTTTGGAAGTGCTGCCACCATGAACATGTGTTCTAAGTGCCACAAAGACATGATGTTGAAACAGGAGCAGGCCAAGCTCGCGGCGTCGTCTATTGGGAATATTATGAATTCATCAAGCAGCAGTGGAAATGAACCTGTTGTTTCTGCAAACGTGAATATCACAGTCAATACACTAGAGCCTAAAACTACATCCGAAGAACCCTTTTTGGGTTCAGGCTTGAAGGAGAATGGTGAGGCAAAGCCGAAGGATGGACCCAAACGCTGCAGCAGCTGCAATAAGCGGGTTGGTTTGACAGGGTTCAGTTGTCGGTGTGGTAACCTGTTCTGTGCTGCACACCGCTACTCAGACAAGCACAATTGTTCCTTCGATTACCGCAGTGCTGAAAGGGATGCCATAGCTAAAGCAAACCCAGTTGTCAAGGCTGAAAAGCTGGATAAGATCTAG 516 0.469 MDHDKTGCQAPPEGPILCINNCGFFGSAATMNMCSKCHKDMMLKQEQAKLAASSIGNIMNSSSSSGNEPVVSANVNITVNTLEPKTTSEEPFLGSGLKENGEAKPKDGPKRCSSCNKRVGLTGFSCRCGNLFCAAHRYSDKHNCSFDYRSAERDAIAKANPVVKAEKLDKI 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5713g00002 171 Gene3D - 94 167 IPR035896 -
Pral5713g00002 171 SMART AN1_Zf_4 112 149 IPR000058 GO:0008270
Pral5713g00002 171 SMART A20_3 15 39 IPR002653 GO:0003677|GO:0008270
Pral5713g00002 171 Pfam AN1-like Zinc finger 112 148 IPR000058 GO:0008270
Pral5713g00002 171 Pfam A20-like zinc finger 16 39 IPR002653 GO:0003677|GO:0008270
Pral5713g00002 171 MobiDBLite consensus disorder prediction 84 112 - -
Pral5713g00002 171 SUPERFAMILY AN1-like Zinc finger 98 166 IPR035896 -
Pral5713g00002 171 ProSiteProfiles Zinc finger AN1-type profile. 106 152 IPR000058 GO:0008270
Pral5713g00002 171 Gene3D - 4 69 - -
Pral5713g00002 171 ProSiteProfiles Zinc finger A20-type profile. 12 46 IPR002653 GO:0003677|GO:0008270
Pral5713g00002 171 PANTHER AN1-TYPE ZINC FINGER PROTEIN 13 171 - -
Pral5713g00002 171 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 17 54 - -
Pral5713g00002 171 FunFam Zinc finger AN1-type containing 6 85 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5713g00002 Pral-Chr5713 12697 18084 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5713g00002 8 171 C2H2 Transcription Factor Family AT3G52800 44.848 9.55e-38 125