Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5711g00003 ATGTCTTCCTTCTTCACGCCCCGGTTTCTTCTTTCATGCGTAACACTTGCGTTATTCCTCCAGACTCCTTCTTATGCGGTCACCGACGATTATTTTGCAGCTTGCAGTACTCTGTACAATTGCGGGAAGATTAAAAACGTCGGGTTTCCTTTCTGGGGACAAGGCCGTCGAGAAAGTTGTGGCTATCCTGATTTGTATCTCAATTGTTCTGACGGTTTGACCTTCATAACAATCCAAAACGTCACATACTTGGTATTGGATGCCAAACCAGAACAACAAATTCTGAGTATCGTTAGATTCGACTTGAAGCAAAGCTTATGCCCAAATCAGCTTCTCAATGCAAGCCTTGACCTTCAGTTGTTTGAGAACGTGCCGGAAACAAAAAATTTTACCCTTTTATATGGTTGTCCGTCAATCCCTTCACTAAACCCCCTACTATTTTATTGTCCCAAAGATGGGTTCCATAATCCATTCGCCTATCTACTGTCGGATAATATTCCTGAAATTTCTGCGTTATGCTCTACAAGCGTGGTTGTTCCTGTTAAAACTCCTACGTCATTGGTTGATCTTCAGGTTTTAGGCATAGTGCAAAAGTGGCTTAGTGATGGGTTTGAAATAAGATGGATAGCTGGAATTGTAGATTGTGATAAGTGTCAGATAAGAGGGGGAGTCTGTGGCTATGATTGGGATTCAAATAAGATTACCTGCTATTACATATTAGGCAACTCAGCGCCGCAGCCTCAGTGGACGCCTCAGCCTCAGGGGACTTCAGGCCCCTTTCTACTGACTTATTGTATGGATAAGTTTGATTCCAACATAAAACCACCTCTCAATTCGTCCTCCACGTTCCTCCTTTTGGTTCCTTTGTTGATCTCTGTCCATATTCCAACATCTCTTGGTGCGAATGATGATCAGTATACAAACTGTTCAAGTGGCTCTTTTATCTGCGGAAGCGTCCAAAACCTCACTTATCCATTTTGGGGGGGAGAAAGAGCAAATTATTGTGGTCTTCCTGATTTCAACCTCACCTGCGAAGCCAATATCCCAAAAATTACCGTACGGTCCCTCAAATACCGGATTCTTCATTTGGAATGGACTACACAGACTCTTGTAGTGGCTCGGGATGATTATTTTGACACTATCTGTCCAACTGATTACAAAAACAACACATTTGATCAAACAACGTTCAAGTATGTGGATGATGGGCTTAGCAATGCGACCTTTCTCTACGATTGTGGTTCTTATAGTTCTCCTCCATTTCCATCAAATCCTTTCGATAAAAAGTGCAAGGTTGCTGATAATGATACAGATATAACAGTCTACTACCTTCCCGGACCATGGTTTATAAGGGATTGCAAAAGTGTTATCATGCCGATTTATGAAGCAAACCTTGGTCGAGTTGAAGCTGCTATACAGGATGTATTACGAGATGGGTTTGCATTGCAATGGATGGTAAACACTGAGGATTGCAACACATGCTCTCAATCTGGTGGCCAGTGCGGCTATGATGGACAATTCTCCTGCTTTTGCAAAGATGGACCCCAAAAAACTTCATGTCCTGGTAAAACGTCAGGATCAATTGAGAAGCTGGGTTCGCGAGTTGCTATAGGCATTTCAACAGGAGTTGGTGGACTTGCTCTAATCTCGATTTTGATTATTTATATATGCAAGAAGCGTTTTGGAATAGAAAATGGGAAATTATTCACAGAGAGAAGAGCATATCATGATCACAATGTTAAATCCTTCATGAGAAACTATGGCTCTTTGGCGCCAAAGAAATATGGTTATGCAGAAGTGAAAAGAATGACAAAATCATTTTCAAACAAATTGGGCGAAGGAGGGTATGGTGTTGTATACAAAGCCAGCCTACCTGATGGTCGTCCAGTGGCAGTTAAAGTAATAAGGGAATCTAAAGGAAGTGGAGAAGAATTTATAAATGAAGTTGCAAGCATCAGCAGAACCTCCCATGTCAACATAGTCACTCTCCTGGGATTTTGTCATGAAAGGAACAAAAGAGTATTAATCTATGAATACCTGTCAAACGGTTCCTTGGATAATTTCATCTATCAGAGAGGGTCTTCAAACGCTCTCTGTGCTTTGGAGTGGAAGTTATTGTACCAGGTTGCTATTGGCATTGCTCGTGGACTGGAGTACTTGCATCGGGGTTGTAACACAAGAATTTTGCATCTTGATATCAAACCCCAAAACATTCTCTTAGATGAAGAATTTTCCCCAAAAATATCCGATTTTGGATTGGCTAAATTATGTCAAAAGAAGGAGAGTATTGTGTCAATACTAGGCACAAGAGGAACAATAGGGTTCATTGCACCAGAAATATTCAGCAGAGCATTTGGCGGTGTTTCTTACAAAGCAGATGTTTATAGCTATGGCATGTTGGTCCTTGAAATGGTTGGAGGAAGGAAGAACTACGACAGTGGAGGATCACAAGCTGATGAGCAGTATTTTCCAGATTGGATTTATAAGGATCTTGAGCATGGTAAGCATCCAGCTAGTTCTTTAGTAATCACAGAGGAAGATGATGAAGTGGTAAGGAAGATGACTTTAGTGAGTCTATGGTGTGTTCAAACCAATCCATCAGATAGACCAGCTATGAGTAAAGTGGTAGAAATGTTAGAAGGACCCCTTCAATCCTTAACGATTCCTCCAAAGCCATCCCTTGAATATCCTACAAAATCATCAGCAGTTATACAATTGTCAAATGCATCTTCCGAAGACATGATTCATACAGTTTCAATAAGCAGTTGA 2766 0.4114 MSSFFTPRFLLSCVTLALFLQTPSYAVTDDYFAACSTLYNCGKIKNVGFPFWGQGRRESCGYPDLYLNCSDGLTFITIQNVTYLVLDAKPEQQILSIVRFDLKQSLCPNQLLNASLDLQLFENVPETKNFTLLYGCPSIPSLNPLLFYCPKDGFHNPFAYLLSDNIPEISALCSTSVVVPVKTPTSLVDLQVLGIVQKWLSDGFEIRWIAGIVDCDKCQIRGGVCGYDWDSNKITCYYILGNSAPQPQWTPQPQGTSGPFLLTYCMDKFDSNIKPPLNSSSTFLLLVPLLISVHIPTSLGANDDQYTNCSSGSFICGSVQNLTYPFWGGERANYCGLPDFNLTCEANIPKITVRSLKYRILHLEWTTQTLVVARDDYFDTICPTDYKNNTFDQTTFKYVDDGLSNATFLYDCGSYSSPPFPSNPFDKKCKVADNDTDITVYYLPGPWFIRDCKSVIMPIYEANLGRVEAAIQDVLRDGFALQWMVNTEDCNTCSQSGGQCGYDGQFSCFCKDGPQKTSCPGKTSGSIEKLGSRVAIGISTGVGGLALISILIIYICKKRFGIENGKLFTERRAYHDHNVKSFMRNYGSLAPKKYGYAEVKRMTKSFSNKLGEGGYGVVYKASLPDGRPVAVKVIRESKGSGEEFINEVASISRTSHVNIVTLLGFCHERNKRVLIYEYLSNGSLDNFIYQRGSSNALCALEWKLLYQVAIGIARGLEYLHRGCNTRILHLDIKPQNILLDEEFSPKISDFGLAKLCQKKESIVSILGTRGTIGFIAPEIFSRAFGGVSYKADVYSYGMLVLEMVGGRKNYDSGGSQADEQYFPDWIYKDLEHGKHPASSLVITEEDDEVVRKMTLVSLWCVQTNPSDRPAMSKVVEMLEGPLQSLTIPPKPSLEYPTKSSAVIQLSNASSEDMIHTVSISS 921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5711g00003 921 ProSitePatterns Protein kinases ATP-binding region signature. 610 632 IPR017441 GO:0005524
Pral5711g00003 921 Pfam Wall-associated receptor kinase galacturonan-binding 35 98 IPR025287 GO:0030247
Pral5711g00003 921 Pfam Wall-associated receptor kinase galacturonan-binding 309 373 IPR025287 GO:0030247
Pral5711g00003 921 Pfam Wall-associated receptor kinase C-terminal 167 238 IPR032872 -
Pral5711g00003 921 Pfam Wall-associated receptor kinase C-terminal 450 513 IPR032872 -
Pral5711g00003 921 FunFam serine/threonine-protein kinase PBS1-like 573 678 - -
Pral5711g00003 921 SUPERFAMILY Protein kinase-like (PK-like) 584 878 IPR011009 -
Pral5711g00003 921 Pfam Protein kinase domain 607 876 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5711g00003 921 ProSiteProfiles Protein kinase domain profile. 604 882 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5711g00003 921 SMART serkin_6 604 878 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5711g00003 921 Gene3D Phosphorylase Kinase; domain 1 578 678 - -
Pral5711g00003 921 Gene3D Transferase(Phosphotransferase) domain 1 679 886 - -
Pral5711g00003 921 ProSitePatterns Serine/Threonine protein kinases active-site signature. 727 739 IPR008271 GO:0004672|GO:0006468
Pral5711g00003 921 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 15 238 IPR044652 GO:0004672
Pral5711g00003 921 FunFam PR5-like receptor kinase 679 890 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5711g00003 Pral-Chr5711 12391 17515 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5711g00003 289 921 Receptor kinase-like Gene Family AT1G66910 42.239 1.99e-160 483
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pral5711g00003 Pkinase 1.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5711g00003 - - pcin:129293521 964.526