Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5710g00002 ATGAAGACTGCTATTCATAAAGGCTTTAAATTTGCATGGGAGGCAAATAATACTCTGTGCTCTGCTTGTCGAAACTCTGGTGGGCAATGCGGTTATAACCAAGCTCAATATTTCAAAGATTTTAAGAAGTTATGTTCTACAAATGCAGCGATTTCAGCAGGAGTAGGTGGACTTGCTCTAATCTCGATTTTGATTATTTATATATTCAAAGAGAGAAGAGCAAATCATGATCACGATCTTCAATCCTTCATGAGAAACTGGGGCTCTTTGGCACCAAAGAAATACAGTTATTCAGAAGTGAAAAGAATGACAAAATCATTTTCAAACAAATTGGGCGAAGGAGGGTATGGCGTTGTATACAAAGCAAGCCTACCTGATGGTCGTCCTGTCGCAGTTAAAGTAATAAGGGAATCTAAAGGAAGTGGAGGAGAATTTATAAATGAAGTTGCAAGTATCAGCAGAACCTCCCATATCAACATAGTCACTCTCCTAGGATTTTGTTATGAAAGGAACAAAAGAGTATTAATCTATGAATACCTGTCAAACGGTTCCTTGGATAATTTCATCTATCAAAGAGGGTCTTCAAACGCTCTCTGTGCTTTGGAGTGGAAGGTATTGTACCAGGTTGCTATTGGCATTGCTCGTGGACTGGAGTACTTGCATCGGGGTTGTAACACAAGAATTTTGCATCTTGATATCAAACCCCAAAACATTCTCTTGGATGAAGAATTTTCCCCAAAAATATCCGATTTTGGATTGGCTAAATTATGTCAAAAGAAGGAGAGTATTGTGTCAATACTAGGCACAAGAGGAACAATAGGGTTCATTGCACCAGAAATATTCAGTAGAGCATTTGGCGGTGTTTCTCACAAAGCAGATGTTTATAGCTATGGCATGTTGGTCCTTGAAATGGTCGGAGGAAGGAAGAACTACGACAGTGGAGGATCACAAGCTGATGAGCAATATTTTCCAGATTGGATTTATAAGGATCTTGAGCATGGTAAGCATCCAGCTAGTTCTTTAGTAATCACAGAGGAAGATGATGAGGCGGTAAAGAAGATGACTTTAGTGAGTCTATGGTGTGTTCAGACAAATCCATCAGATAGACCAGCTATGAGTAAAGTGGTAGAAATGTTAGAAGGACCCCTTCAATCCTTAACGGTTCCTCCAAAGCCATCCCTTGAATATCCTACAAAATCATCAGCAGTTATACAATTGTCAAATGCATCTTCCGAAGACATGATTCATACAGTTTCAATAAGCAGTTGA 1269 0.3916 MKTAIHKGFKFAWEANNTLCSACRNSGGQCGYNQAQYFKDFKKLCSTNAAISAGVGGLALISILIIYIFKERRANHDHDLQSFMRNWGSLAPKKYSYSEVKRMTKSFSNKLGEGGYGVVYKASLPDGRPVAVKVIRESKGSGGEFINEVASISRTSHINIVTLLGFCYERNKRVLIYEYLSNGSLDNFIYQRGSSNALCALEWKVLYQVAIGIARGLEYLHRGCNTRILHLDIKPQNILLDEEFSPKISDFGLAKLCQKKESIVSILGTRGTIGFIAPEIFSRAFGGVSHKADVYSYGMLVLEMVGGRKNYDSGGSQADEQYFPDWIYKDLEHGKHPASSLVITEEDDEAVKKMTLVSLWCVQTNPSDRPAMSKVVEMLEGPLQSLTVPPKPSLEYPTKSSAVIQLSNASSEDMIHTVSISS 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5710g00002 422 SUPERFAMILY Protein kinase-like (PK-like) 86 379 IPR011009 -
Pral5710g00002 422 Pfam Protein kinase domain 108 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5710g00002 422 ProSitePatterns Protein kinases ATP-binding region signature. 111 133 IPR017441 GO:0005524
Pral5710g00002 422 SMART serkin_6 105 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5710g00002 422 ProSiteProfiles Protein kinase domain profile. 105 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5710g00002 422 Gene3D Phosphorylase Kinase; domain 1 80 179 - -
Pral5710g00002 422 ProSitePatterns Serine/Threonine protein kinases active-site signature. 228 240 IPR008271 GO:0004672|GO:0006468
Pral5710g00002 422 Gene3D Transferase(Phosphotransferase) domain 1 180 388 - -
Pral5710g00002 422 Pfam Wall-associated receptor kinase C-terminal 2 37 IPR032872 -
Pral5710g00002 422 FunFam S-receptor-like serine/threonine-protein kinase 73 179 - -
Pral5710g00002 422 PANTHER RUST RESISTANCE KINASE LR10-RELATED 87 399 IPR045874 GO:0004672
Pral5710g00002 422 FunFam PR5-like receptor kinase 180 391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5710g00002 Pral-Chr5710 31027 34118 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5710g00002 1 417 Receptor kinase-like Gene Family AT5G38260 49.543 6.47e-142 417
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pral5710g00002 Pkinase 6.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5710g00002 - - pcin:129293521 656.751