Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5708g00001 TCAAGGGATAAAGGGGCTATCATTGGTGAAGTTTTCGGAGGTGCAGCATTTGCTTTTATCCTTCTTGCATTATTTGCTTGGATTAGACTACCAAAAACTACTAAGGCTTCCATAGGAGACATAATTGAAGCAACCAATTTGAATGGTCTGGTTACTTACAACTATAACGAGTTGGAGTATGCAACTAATAATTTTAGGGAACAAAATAAACTAGGAGAGGGTGGATTTGGTGCTGTATATAAGGGAAATTTGAAAAATGGAAAAGTAGTTGCAATCAAGAAATTAAATTTATGCAGCTCAAAAAGGATACAAGAAGATTTTGAAAGTGAAGTGAAGCTTATCAGTAATGTTCATCATCGCAACCTTATCCGACTTTTGGGATGGTGTATTAAAGACTATGATAGAATCCTTGTTTATGAGTACATGGAGAACAACAGTCTTGACAAATTCATATTCGGTAATATCCTATCAATTACAATATTTTATACTATTCATTAA 498 0.3373 SRDKGAIIGEVFGGAAFAFILLALFAWIRLPKTTKASIGDIIEATNLNGLVTYNYNELEYATNNFREQNKLGEGGFGAVYKGNLKNGKVVAIKKLNLCSSKRIQEDFESEVKLISNVHHRNLIRLLGWCIKDYDRILVYEYMENNSLDKFIFGNILSITIFYTIH 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5708g00001 165 Pfam Protein tyrosine and serine/threonine kinase 68 151 IPR001245 GO:0004672|GO:0006468
Pral5708g00001 165 SUPERFAMILY Protein kinase-like (PK-like) 44 156 IPR011009 -
Pral5708g00001 165 Gene3D Phosphorylase Kinase; domain 1 36 141 - -
Pral5708g00001 165 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 5 154 - -
Pral5708g00001 165 FunFam Cysteine-rich receptor-like protein kinase 2 32 141 - -
Pral5708g00001 165 ProSitePatterns Protein kinases ATP-binding region signature. 71 94 IPR017441 GO:0005524
Pral5708g00001 165 ProSiteProfiles Protein kinase domain profile. 65 165 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5708g00001 Pral-Chr5708 1365 2191 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5708g00001 15 154 Receptor kinase-like Gene Family AT4G21400 43.571 5.97e-32 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral5708g00001 PK_Tyr_Ser-Thr 4.3e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5708g00001 - - pcin:129301893 191.045