Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5707g00002 ATGCTTCTGCAACTGCAACAAAAGGCCCCCCTCTTCTTAAGCCTCATACTCTGCTCATGGTGGACCTTTGACGGCGTCGTTTCAGATCCGCAGGGTACTATTTTGAAAATGCGGTGCAGCAAACACAACGCCAGTGACGTGTCCATCTTTCATGAGAACCTAAACGCGACATTACAGCACCTGAGAGAGCAAGTCAGAGACCAAAGCAAACACTTCGCCACGGCACAGTCATTGAAAGGCCACAATCCCGCCTATGGTCTTTTTCAGTGCAGAAACTACCTTTCCATTCCTGACTGTCTCGCTTGCTTCGACTCCGCCGCTGTGAATGCACGAAACTGCTCCGTGGGATTGAAGTGGGCTAGAATCCTCTACGATGACTGCTTTCTCAGGTACGACAACCTTTACTTCTTCAACCTAGCTAGAGACTACCCTAGTAGCATATTTTGTGGGAAGCAAGTGAAAAATTCCTCTATGCTTGCCTCAACGGCGCAAGAAGTGCTAACGAATTTGAACATAGTAATCCCAAGAATCCCAAATTTTTTTGCAGCTACCAAGACACCTGTGCCTAATAGTCATGGCTTATATATTTATGCCTTTGCTCAATGTGTTGAGACAGTCTCACAAAGTGGTTGCCAGGATTGCCTTTACCATGCGTTAATCAACTTTCATACTTGTCTTCCCAACTCAAATGCGAGGGCTTATGAAGCTGGTTGTTTCATGAGATACTCCACAAATGCCTTTTTTGCTGATAATCAAACCATTGATATCAACCACTTTTTGAAACAAGGTTCAAGGGATAAAGGGGCTATCATTGGTGAAGTTTTCGGAGGTGCAGCATTTGCTTTTATCCTTCTTGCATTATTTGCTTGGATTAGACTACCAAAAACTACTAAGGCTTCCATAGGAGACATAATTGAAGCAACCAATTTGAATGGTCTGGTTACTTACAACTATAACGAGTTGGAGTATGCAACTAATAATTTTAGGGAACAAAATAAACTAGGAGAGGGTGGATTTGGTGCTGTATATAAGGGAAATTTGAAAAATGGAAAAGTAGTTGCAATCAAGAAATTAAATTTATGCAGCTCAAAAAGGATACAAGAAGATTTTGAAAGTGAAGTGAAGCTTATCAGTAATGTTCATCATCGCAACCTTATCCGACTTTTGGGATGGTGTATTAAAGACTATGATAGAATCCTTGTTTATGAGTACATGGAGAACAACAGTCTTGACAAATTCATATTCGGTAAAAGGAAAGGTTTTCTCAACTGGAAGCAGCGATATGATATAATTCTAGGCATGGCAAGGGGTTTGGCCTATTTACATGAAGAATTACATATTCGTATAGTACATAGAGATATAAAGCCTAATAACATCCTCTTAGATGATGATCTTCAGCCTAAAATTGCTGACTTTGGATTGGCAAGACTTTTACATGAGGAGAAATATCATCTTAGTGCAAACTTTGCAGGAACATTAGGATATGCAGCACCAGAGTATGCAATTCATGGCCAACTATCTGAGAAGGTTGATGTCTACAGCTATGGTGTGGTTGTTTTAGAAATAATCAGTGGTCAAAAAAGTAAGGAATTGAAGGTTAATGATGATGTTGAAGGTGAATTCCTTTTACAAAAGGCTTGGAAACTATATGCAAGTGGCACACCTTTAGAGTTGGTGGACAATACCTTGGAATCCAATGACTATGATGCAGAAGAAGTAAAGAAAATCATAGAAATTGGCCTACTTTGCACCCAAGAATCTGCTACACTTAGACCAACGATGTCTGAAGTAATTGGTTTACTCCAATATAGGGGTTTACTAGAGAGACCATTAATACCTATCTTATTTTGA 1851 0.3998 MLLQLQQKAPLFLSLILCSWWTFDGVVSDPQGTILKMRCSKHNASDVSIFHENLNATLQHLREQVRDQSKHFATAQSLKGHNPAYGLFQCRNYLSIPDCLACFDSAAVNARNCSVGLKWARILYDDCFLRYDNLYFFNLARDYPSSIFCGKQVKNSSMLASTAQEVLTNLNIVIPRIPNFFAATKTPVPNSHGLYIYAFAQCVETVSQSGCQDCLYHALINFHTCLPNSNARAYEAGCFMRYSTNAFFADNQTIDINHFLKQGSRDKGAIIGEVFGGAAFAFILLALFAWIRLPKTTKASIGDIIEATNLNGLVTYNYNELEYATNNFREQNKLGEGGFGAVYKGNLKNGKVVAIKKLNLCSSKRIQEDFESEVKLISNVHHRNLIRLLGWCIKDYDRILVYEYMENNSLDKFIFGKRKGFLNWKQRYDIILGMARGLAYLHEELHIRIVHRDIKPNNILLDDDLQPKIADFGLARLLHEEKYHLSANFAGTLGYAAPEYAIHGQLSEKVDVYSYGVVVLEIISGQKSKELKVNDDVEGEFLLQKAWKLYASGTPLELVDNTLESNDYDAEEVKKIIEIGLLCTQESATLRPTMSEVIGLLQYRGLLERPLIPILF 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5707g00002 616 ProSitePatterns Protein kinases ATP-binding region signature. 334 357 IPR017441 GO:0005524
Pral5707g00002 616 Gene3D Phosphorylase Kinase; domain 1 302 404 - -
Pral5707g00002 616 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 86 602 - -
Pral5707g00002 616 ProSiteProfiles Gnk2-homologous domain profile. 141 247 IPR002902 -
Pral5707g00002 616 Pfam Protein kinase domain 329 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5707g00002 616 ProSiteProfiles Protein kinase domain profile. 328 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5707g00002 616 SMART serkin_6 328 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5707g00002 616 ProSitePatterns Serine/Threonine protein kinases active-site signature. 449 461 IPR008271 GO:0004672|GO:0006468
Pral5707g00002 616 Coils Coil 51 71 - -
Pral5707g00002 616 ProSiteProfiles Gnk2-homologous domain profile. 32 136 IPR002902 -
Pral5707g00002 616 SUPERFAMILY Protein kinase-like (PK-like) 309 602 IPR011009 -
Pral5707g00002 616 FunFam Cysteine-rich receptor-like protein kinase 2 295 404 - -
Pral5707g00002 616 Pfam Salt stress response/antifungal 39 133 IPR002902 -
Pral5707g00002 616 Pfam Salt stress response/antifungal 159 244 IPR002902 -
Pral5707g00002 616 CDD STKc_IRAK 334 602 - -
Pral5707g00002 616 Gene3D Transferase(Phosphotransferase) domain 1 405 605 - -
Pral5707g00002 616 Gene3D - 31 136 IPR038408 -
Pral5707g00002 616 Gene3D - 144 247 IPR038408 -
Pral5707g00002 616 FunFam Cysteine-rich receptor-like protein kinase 2 405 609 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5707g00002 Pral-Chr5707 18082 26285 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5707g00002 10 602 Receptor kinase-like Gene Family AT1G70520 35.726 2.97e-117 361
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral5707g00002 Pkinase 8.1e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5707g00002 - - gmx:100813585 708.753