Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5705g00030 ATGAATCACAGCAACAACGACGGCGACGACCATAACAATGTGAACGTGGAAGAAGACCCGACGACGGCCTGCATCGCCGCCATTGGAATCGCCTTACTCCTAAGGCTTATGTGCCTCATTTTCGCTATTCCTCCAGTCCTCGCCGTCTTCATCTTCTGCCTCGCCTCGATCACCTTCATACAGTTCTGGTTCAGAGAAGATGAGCCGGAGATCGAACACATGGAGGATTTCGACTTTACGGGCAGAGACCTAGAAGACAACGAGAAGGCAGTGAAGTTTCTGGAAGCATTCTTGAGGGCATTGAAGGGGAAAGAAGAAAGAGGAAGAGACGGGAGAAAGAAGAAGGAAGGGTCGAAGAACGCGGAGGGTAGCATTAAGTGTTTCGGGAGCGAAGAAATAGTGGAATTAGGTTACAGGGAGTGTTCGATTTGTATTGATGATTTCCAGAAAGGAGAGAAGTGTCTGGTTTTTCCGCGTTGTGGCCATATATTTCACTGCAGGTGCATAGCGCGCTGGGTGAAGTTGAAGATGAAGAAACTGACGTGTCCAGTTTGTCGTTGCAGCTTCGGCTCGAATGCAAACGGAACCGGAGGATTCAGAAGGTGCTCATGCGAATTTGCGGCCCCTTGTCCTGCCACTTAA 642 0.4969 MNHSNNDGDDHNNVNVEEDPTTACIAAIGIALLLRLMCLIFAIPPVLAVFIFCLASITFIQFWFREDEPEIEHMEDFDFTGRDLEDNEKAVKFLEAFLRALKGKEERGRDGRKKKEGSKNAEGSIKCFGSEEIVELGYRECSICIDDFQKGEKCLVFPRCGHIFHCRCIARWVKLKMKKLTCPVCRCSFGSNANGTGGFRRCSCEFAAPCPAT 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5705g00030 213 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 132 198 IPR013083 -
Pral5705g00030 213 SMART ring_2 141 185 IPR001841 -
Pral5705g00030 213 Pfam Ring finger domain 140 186 IPR001841 -
Pral5705g00030 213 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 21 191 - -
Pral5705g00030 213 SUPERFAMILY RING/U-box 140 192 - -
Pral5705g00030 213 ProSiteProfiles Zinc finger RING-type profile. 141 186 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5705g00030 Pral-Chr5705 160360 161001 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5705g00030 114 189 C3H Transcription Factor Family AT3G10910 39.474 6.53e-12 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5705g00030 - - lang:109363523 95.5153