Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5705g00029 ATGGCTGATCAACTTTCAGATTCTCTCGCAACCGTCAGATCCTCATCAGGAGACGACATTATCATCGGAGATTCTCTTCAAACCAGCCAATACGCTGTCACGTTCGATCTTCGAACCACCATCATCATCGGCTTCTCCGTCTCACTCTTCTTTTGCGTCGTCTACCACATTCTCTGCAGCTTCTTCTACCGGCTCATCGACACCAGGATTTACCATCATCGCGACGTCAACGTCGAAGAAGGAACAGACCTAATGCCCGTCGACGGCGATACGTCGCGGTCGCAGCATCAGGTGGCGCTGTTTCAGGCTCTGGTTCTGAGCAACATGCAGGCTTGGGTGATGGTGGGAGCATTAATGGAGGATTCTTCGGAGGAGGTGGACGAGAGCAGAGGGGAAATCCTGAGGGCGATGCAGAAATTGCCGGCATTGGTGAAGTACGGAAGCGAGCATAATAATGAGAATAATGAAGTGACAAGAAATTGTATGGATTGCGTAATATGCTTGGAGGACTTTAAGGTTGGCGAACTGTGTCAGGTTTTCCCTAGGTGCAATCATGTGTTTCATTCGAGTTGCATAGATTGTTGGTTGGCCACCAAGCTTACGTGCCCAACTTGTCGGGGTTGCATTACATGA 633 0.4961 MADQLSDSLATVRSSSGDDIIIGDSLQTSQYAVTFDLRTTIIIGFSVSLFFCVVYHILCSFFYRLIDTRIYHHRDVNVEEGTDLMPVDGDTSRSQHQVALFQALVLSNMQAWVMVGALMEDSSEEVDESRGEILRAMQKLPALVKYGSEHNNENNEVTRNCMDCVICLEDFKVGELCQVFPRCNHVFHSSCIDCWLATKLTCPTCRGCIT 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5705g00029 210 Pfam Ring finger domain 163 206 IPR001841 -
Pral5705g00029 210 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 37 206 IPR044675 -
Pral5705g00029 210 SMART ring_2 164 205 IPR001841 -
Pral5705g00029 210 SUPERFAMILY RING/U-box 163 209 - -
Pral5705g00029 210 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 119 210 IPR013083 -
Pral5705g00029 210 CDD RING-H2_PA-TM-RING 163 206 - -
Pral5705g00029 210 ProSiteProfiles Zinc finger RING-type profile. 164 206 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5705g00029 Pral-Chr5705 158202 158834 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5705g00029 124 206 C3H Transcription Factor Family AT1G53010 38.554 4.22e-16 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5705g00029 - - gmx:102660073 153.295