Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral5705g00029 | ATGGCTGATCAACTTTCAGATTCTCTCGCAACCGTCAGATCCTCATCAGGAGACGACATTATCATCGGAGATTCTCTTCAAACCAGCCAATACGCTGTCACGTTCGATCTTCGAACCACCATCATCATCGGCTTCTCCGTCTCACTCTTCTTTTGCGTCGTCTACCACATTCTCTGCAGCTTCTTCTACCGGCTCATCGACACCAGGATTTACCATCATCGCGACGTCAACGTCGAAGAAGGAACAGACCTAATGCCCGTCGACGGCGATACGTCGCGGTCGCAGCATCAGGTGGCGCTGTTTCAGGCTCTGGTTCTGAGCAACATGCAGGCTTGGGTGATGGTGGGAGCATTAATGGAGGATTCTTCGGAGGAGGTGGACGAGAGCAGAGGGGAAATCCTGAGGGCGATGCAGAAATTGCCGGCATTGGTGAAGTACGGAAGCGAGCATAATAATGAGAATAATGAAGTGACAAGAAATTGTATGGATTGCGTAATATGCTTGGAGGACTTTAAGGTTGGCGAACTGTGTCAGGTTTTCCCTAGGTGCAATCATGTGTTTCATTCGAGTTGCATAGATTGTTGGTTGGCCACCAAGCTTACGTGCCCAACTTGTCGGGGTTGCATTACATGA | 633 | 0.4961 | MADQLSDSLATVRSSSGDDIIIGDSLQTSQYAVTFDLRTTIIIGFSVSLFFCVVYHILCSFFYRLIDTRIYHHRDVNVEEGTDLMPVDGDTSRSQHQVALFQALVLSNMQAWVMVGALMEDSSEEVDESRGEILRAMQKLPALVKYGSEHNNENNEVTRNCMDCVICLEDFKVGELCQVFPRCNHVFHSSCIDCWLATKLTCPTCRGCIT | 210 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral5705g00029 | 210 | Pfam | Ring finger domain | 163 | 206 | IPR001841 | - | |
Pral5705g00029 | 210 | PANTHER | RING-H2 FINGER PROTEIN ATL51-RELATED | 37 | 206 | IPR044675 | - | |
Pral5705g00029 | 210 | SMART | ring_2 | 164 | 205 | IPR001841 | - | |
Pral5705g00029 | 210 | SUPERFAMILY | RING/U-box | 163 | 209 | - | - | |
Pral5705g00029 | 210 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 119 | 210 | IPR013083 | - | |
Pral5705g00029 | 210 | CDD | RING-H2_PA-TM-RING | 163 | 206 | - | - | |
Pral5705g00029 | 210 | ProSiteProfiles | Zinc finger RING-type profile. | 164 | 206 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral5705g00029 | Pral-Chr5705 | 158202 | 158834 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral5705g00029 | 124 | 206 | C3H Transcription Factor Family | AT1G53010 | 38.554 | 4.22e-16 | 71.2 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral5705g00029 | - | - | gmx:102660073 | 153.295 |