Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5705g00028 ATGGGGCCTCGCCGTAGAAACTTCGTCCGGCCATTGGGGTCTCCGGCTGATGCTGAATCCAGCCACTTCTTCAAGATCATACTTCCTGAAACTATTCGTGCCCAAAAACTGAGAATTCCCAAGGAGTTCGCAAGAAGATTTGAGAATGAACTGTCTACTAGTGAGGCAACGATTGGTGTACCAGATGGTCGTATCTGGAGAATGGAACTGAAGAAGTCTGAAAAGGAGGTTTGCTTCTGCAAGGGTTGGCGGGAATTTGTGAAGTACTACTCTATTAAATTTGGCTTCATTTTAGCGTTTAAATATGAAGGCAATTCACACTTCTCTTCGGTTATCTTTGATGTGAGTGCTGCTGAGATTCACTATCCACTATGCAAAGATAACTCTGAGAAGCAGAACTTGGAATCCAAATGTCCTGGAAAAAAGTCCGGTTTTAATCACTGTAGCTACAACACAAGACGCAAAAGGCATGAGCTTGAAGATCAAGAAGAAATAATCGACATAGATTGTGCGAATGATCTGAGCCCTGGAAAATTAGGAAACAACAAAAGTTATAATTCTGCCGAGAATTCAAGAAAGCAAGAGAGAAACCGATCTGGGCCAGGCCGTTCTTCCAAAATGATGAAGAAAACTTTGAGTAGAAAGCAGAGAGCTATAAGAGCTGCCCAAAATTTCCAACCAAAAAAACCATCCTTTACTGCAATAATAAAATCACCAAATCTGACTGCTCGTTATATGGATGTGCCTGGGGCATTTTCGAAAGCTCATCTGGAGAAAGTTGATTCTGTGAAGCTTCAGGTTTCTAATGGAAACGATGGGCAGTTAACTGTATTAAACAGCGTTCAAATGTTCGAATGTGTGGGGGCTGGATCGATTTCGCAAGGGCCAACAATCTGA 897 0.4225 MGPRRRNFVRPLGSPADAESSHFFKIILPETIRAQKLRIPKEFARRFENELSTSEATIGVPDGRIWRMELKKSEKEVCFCKGWREFVKYYSIKFGFILAFKYEGNSHFSSVIFDVSAAEIHYPLCKDNSEKQNLESKCPGKKSGFNHCSYNTRRKRHELEDQEEIIDIDCANDLSPGKLGNNKSYNSAENSRKQERNRSGPGRSSKMMKKTLSRKQRAIRAAQNFQPKKPSFTAIIKSPNLTARYMDVPGAFSKAHLEKVDSVKLQVSNGNDGQLTVLNSVQMFECVGAGSISQGPTI 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5705g00028 298 Gene3D - 210 285 IPR015300 -
Pral5705g00028 298 MobiDBLite consensus disorder prediction 179 212 - -
Pral5705g00028 298 CDD B3_DNA 22 114 IPR003340 GO:0003677
Pral5705g00028 298 Gene3D - 14 117 IPR015300 -
Pral5705g00028 298 SUPERFAMILY DNA-binding pseudobarrel domain 19 116 IPR015300 -
Pral5705g00028 298 Pfam B3 DNA binding domain 23 109 IPR003340 GO:0003677
Pral5705g00028 298 SMART B3_2 23 116 IPR003340 GO:0003677
Pral5705g00028 298 ProSiteProfiles B3 DNA-binding domain profile. 22 116 IPR003340 GO:0003677
Pral5705g00028 298 PANTHER B3 DOMAIN-CONTAINING 17 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5705g00028 Pral-Chr5705 155381 157236 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5705g00028 23 268 B3 DNA Binding Superfamily AT3G18990 27.946 1.05e-30 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Pral5705g00028 B3 9.1e-13 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5705g00028 - - pcin:129315065 306.219