Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5705g00006 ATGGAGGCTCAAACTAAATTCAAAGTTCCTGATAACTTTCAGGAGCGGAACAATCTTCCTCTTACTGTTAAGATCAAAACCAAGAAAGATGGATTGTTCAACAAGAACACAAAATCAGAAGAGAAAGTGATACTAAAAGGAGTGTCAGGGATAGTGGAACCAGGCGAAATGCTAGCGATGTTAGGACCATCAGGAAGTGGCAAAACGACACTCCTAAATGCATTAGGAGGCAGACTCAAAAGCAACTCCAAACTGCAAGGAACGATAACTTACAACAACAAACCCTTCTCAAACACAACCAAGAGAAACATCGGATTCGTCACCCAAGATGACATCCTCTACCCACACTTAACTGTCACTGAAACCTTAGTCTTCACAGCCCTTCTCAGACTACCGAACACTCTCACCAAAAAAGAGAAAGTCTTACGGGCAGAAGCTGTGATATCCCAGCTAGGGTTAACCAAGTGTAAGGATAGCATAATAGGAGAGTCATTGGTAAGAGGGGTTTCAGGAGGAGAGAGGAAGAGGGTCAGTATTGGGCAAGAGATGTTGGTAAACCCCAGCTTGCTGTTTTTGGACGAGCCAACGTCTGGACTTGACTCAACCACAGCTCAAAGGATTCTGTCCACTCTGCGGGAGCTGGCTAATGCCGGAAGGACCGTGGTTATGACCATACACCAACCTTCAAGCAGATTGTACTACATGTTTTGTAAGGTTTTGTTGTTATCTGAAGGAAGCCCTTTGTTCTTTGGGAAGGGTTCTGATGCCATGAACTATTTTCTGAGTCTTGGATATGCCCCCACAGTAGGCATGAATCCTTCTGATTTCCTTTTGGATCTTGCAAATGGTATGTCTTCTTGTTCTGGGGATTTTGCAGGAATTTATACTGATGAATCTTGTGAAGACCATGCCTCACTTAAGCAGACGTTGGTGTTAGCATACAGGCATGACCTTGAAGCACAAGTGAAGGAAATGGTTCGTGCAGTAAGTGATTTCGGTAAAACTGGAAGTAGATTTCAAGGGGAATCAGATGGGTGGGCGACAAGTTGGTTTCAGCAATTTAATGTGTTGCTCAAAAGGGGAGTGAGGGAGAGAAGATACGAGTCATTCTCTGGCCTCAAAGTCACTCAGATCGTTATGGCGGCCATTATTTCAGGACTTCTATGGTTTAAGTCTGACATTTCGCACTTGCAGGATCAAACCGGTCTCCTATTCTTCATAGCTAGTTTCTGGAGTTTCTTCCCAATGTATCAAGCCATCTTCACATTCCCACAAGAAAGGACAATGCTTGAGAAAGAAAGATCCGCTGGAATATACAGGCTGTCCTCTTACTTCATCTCAAGGATTGTAGCTGACCTGCCCATGGAGCTTGTCCTTCCCACAGTTTTTCTCATCATATCCTACTGGATGGCGGGCCTCAAACCCCATGCCCTGAATTTCTCGTACACACTCTTCGGCCTCTTACTCAATGTGCTGGTCTCACAAGGCCTAGGCCTTGCTCTCGGCGCAATTGTGATGGATCAAAGCTCTGCAAGTACACTTGGCTCTGTGGTTATGCTGACTTTCATGCTAGCTGGGGGATACTTTGTCCAACATGTCCCTAAATTTATAGCTTGGATCAAGTACTTCTCCATCAGCTACTACATATACCGACTGTTTGTAGGGTCTCAGTTTGAGAGTAGGGACACATACCCCTGTTCTGAAGGGCAGTGTTTGGTTGCAGAATTTCCTTCTATAAAGCAAATGGGGCTGGATCCGGAGGACCAAGTGATTGCTGCTTTGGCTCTAGTGATAATGCTGATAGGTTTTAGACTCATAGCTTATTTAGCTCTGATGAGGATTGGGGTGACTAAGAAATTTGTCTAG 1866 0.4469 MEAQTKFKVPDNFQERNNLPLTVKIKTKKDGLFNKNTKSEEKVILKGVSGIVEPGEMLAMLGPSGSGKTTLLNALGGRLKSNSKLQGTITYNNKPFSNTTKRNIGFVTQDDILYPHLTVTETLVFTALLRLPNTLTKKEKVLRAEAVISQLGLTKCKDSIIGESLVRGVSGGERKRVSIGQEMLVNPSLLFLDEPTSGLDSTTAQRILSTLRELANAGRTVVMTIHQPSSRLYYMFCKVLLLSEGSPLFFGKGSDAMNYFLSLGYAPTVGMNPSDFLLDLANGMSSCSGDFAGIYTDESCEDHASLKQTLVLAYRHDLEAQVKEMVRAVSDFGKTGSRFQGEXSDGWATSWFQQFNVLLKRGVRERRYESFSGLKVTQIVMAAIISGLLWFKSDISHLQDQTGLLFFIASFWSFFPMYQAIFTFPQERTMLEKERSAGIYRLSSYFISRIVADLPMELVLPTVFLIISYWMAGLKPHALNFSYTLFGLLLNVLVSQGLGLALGAIVMDQSSASTLGSVVMLTFMLAGGYFVQHVPKFIAWIKYFSISYYIYRLFVGSQFESRDTYPCSEGQCLVAEFPSIKQMGLDPEDQVIAALALVIMLIGFRLIAYLALMRIGVTKKFV 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5705g00006 622 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 23 609 - -
Pral5705g00006 622 FunFam ABC transporter G family member 22 32 263 - -
Pral5705g00006 622 SMART AAA_5 54 246 IPR003593 GO:0016887
Pral5705g00006 622 Pfam ABC-2 type transporter 353 559 IPR013525 GO:0016020|GO:0140359
Pral5705g00006 622 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 27 269 IPR003439 GO:0005524
Pral5705g00006 622 Gene3D - 33 261 IPR027417 -
Pral5705g00006 622 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 40 260 IPR027417 -
Pral5705g00006 622 ProSitePatterns ABC transporters family signature. 169 183 IPR017871 GO:0005524|GO:0016887
Pral5705g00006 622 Pfam ABC-2 type transporter 226 288 IPR043926 GO:0140359
Pral5705g00006 622 Pfam ABC transporter 45 197 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5705g00006 Pral-Chr5705 44475 47235 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5705g00006 52 230 Calmodulin-binding Proteins AT2G36910 29.101 1.24e-11 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5705g00006 K05681 - gmx:100816135 827.394