Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5705g00005 ATGGGAGTTCCAGAGACAGACCTGCTAGCTCAACTGAGTCTGCCCCCGGGTTTTCGGTTTTACCCGACGGACGAGGAGCTTCTGGTTCAGTATCTATGCCGGAAGGTGGCCGGCCACCATTTCTCTCTACAAATCATTGGCGAAATTGACTTGTACAAATTCGACCCATGGCTTCTTCCAAGCAAAGCCATTTTTGGTGAGAAAGAATGGTACTTCTTTAGCCCGAGAGACCGAAAGTACCCGAACGGCTCCCGACCCAACAGGGTCGCCGGGTCGGGGTACTGGAAAGCCACCGGAACCGACAAAATCATCACCACCGCTGGTCGAAAGGTTGGCATAAAGAAAGCTCTCGTTTTCTATATTGGGAAAGCACCCAAAGGCACCAAAACCAATTGGATCATGCACGAGTACCGCCTCCTGGATTCCTCCCGAAAGAGCGGAAGCACCAAGCTCGATGATTGGGTTCTGTGTCGGATATATAAGAAGAACTCGAGCTCCCAGAAGACTGCGCCTATGATGGTTCCAAGCAAAGAATACGAATACAGTAATGGGTCGTCTTCGTCATCGTCATCTCACTTGGACGACGTGCTGGAATCGTTACCAGAAATCGACGATCGGTATTTCGCGTTGCCACGTGTGAACTCGCTGAAGACGTGGCAGCAGGAGGAGAAGCTGAATGTTCAGAATCTGAATGGCGGTAATAATTTCGTGGAGTGGGCCAACCCGGCGGTTCTGAACTCGGTGGCGGAGTTCATTTCCGGGAATCAAGCGCAGACCCAATCTCAATCTCAAGGGATGGTGAATTACAGTTCCATGAGCGACGTGCAACATGTCCCGTCGATGCGGCCGCTGACGGTGCCGGAGGAGGAGGTCCAGAGCGAAGTGAGTAATTCCGGGTTTTATCAGCAGCGTTCAAATGGGTTCACGCAGGGGTTTGGTAACTCAGTGAACGACCCGTATGGATTCAGATGCCCGAATCCGACCATGGGGTTCGGATTCAGGCAATGA 1008 0.5208 MGVPETDLLAQLSLPPGFRFYPTDEELLVQYLCRKVAGHHFSLQIIGEIDLYKFDPWLLPSKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITTAGRKVGIKKALVFYIGKAPKGTKTNWIMHEYRLLDSSRKSGSTKLDDWVLCRIYKKNSSSQKTAPMMVPSKEYEYSNGSSSSSSSHLDDVLESLPEIDDRYFALPRVNSLKTWQQEEKLNVQNLNGGNNFVEWANPAVLNSVAEFISGNQAQTQSQSQGMVNYSSMSDVQHVPSMRPLTVPEEEVQSEVSNSGFYQQRSNGFTQGFGNSVNDPYGFRCPNPTMGFGFRQ 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5705g00005 335 FunFam NAC domain-containing protein 72-like 23 167 - -
Pral5705g00005 335 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 250 - -
Pral5705g00005 335 Gene3D NAC domain 23 168 IPR036093 GO:0003677|GO:0006355
Pral5705g00005 335 ProSiteProfiles NAC domain profile. 14 162 IPR003441 GO:0003677|GO:0006355
Pral5705g00005 335 SUPERFAMILY NAC domain 9 163 IPR036093 GO:0003677|GO:0006355
Pral5705g00005 335 Pfam No apical meristem (NAM) protein 15 139 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5705g00005 Pral-Chr5705 37606 39363 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5705g00005 1 335 NAC Transcription Factor Family AT4G27410 60.057 2.00e-123 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral5705g00005 NAM 2.9e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5705g00005 - - qlo:115958173 466.463