Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5705g00004 ATGGAGAGCACCGACTCATCCACCGGTTCCCAGCAACCGAACCTGCCGCCCGGATTCCGGTTCCACCCCACCGACGAGGAGCTCGTCGTTCACTACCTCAAGAAGAAGGCAGCCTCCGCTCCCCTCCCCGTCGCCATCATCGCCGAGGTCGACCTCTACAAGTTCGACCCCTGGGAACTCCCCGCTAAGGCAGCATTTGGGGAGCAAGAGTGGTACTTCTTCAGCCCGAGGGACAGGAAGTACCCGAACGGAGCGAGGCCAAACAGGGCAGCGACATCTGGGTATTGGAAGGCGACGGGGACGGATAAGCCCGTGCTCACATCCAATGGAAACCAAAAGGTGGGGGTCAAGAAAGCTTTGGTCTTTTACGGTGGGAAACCCCCAAGAGGCATCAAAACCAATTGGATCATGCACGAGTACCGCCTCGTCGATAATAAGCCTAACAATAAGCCTCCTGGTTGTGACTTAGGCAACAAGAAAAACTCTCTCCGGCTGGACGACTGGGTGCTGTGCCGAATCTACAAGAAGACCAACACGCAGAGATCACCTATGGATCATGAAAGGGACGATTCGATGGATGATATGATTGGGATTGGAGGGGTGCCTCCTTCGATCAACGTGGGCCAAATGAATGCGAGGTTTCACCTTTCCAAGATGTCCACGTTAAGCTATGGTGGAACGGCACTACTGGAGAATCATCATCATGATCAGAACTTGCTGGAAGGAGTCATATCGAGCAGCAACAACAATAAGGAATCAGATCTTCAACTTCCCTTTGTGCCAACCATGACTGCTTCGACTGCCTCTAATTCAAACACGAAACGAACACTTTCGTCGATGTATTGGAGCAATAACAGTGAAGAGGAGGACGTGAATGGCACTAAAAGGTTGGGTTTGGATGAAGATCATCATCATCATCATCATAACAACAACAACAACAACGAGGGTGGTGGTAATTCCATAGCCACCTTGCTTAACCAGATTCCTCAGACTCCTTCATTGCACCACCAGCCAATGCTTAGCTCATACCCATATTCTATACCTGGGATGAATTGGTACGCTTGA 1065 0.5099 MESTDSSTGSQQPNLPPGFRFHPTDEELVVHYLKKKAASAPLPVAIIAEVDLYKFDPWELPAKAAFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVLTSNGNQKVGVKKALVFYGGKPPRGIKTNWIMHEYRLVDNKPNNKPPGCDLGNKKNSLRLDDWVLCRIYKKTNTQRSPMDHERDDSMDDMIGIGGVPPSINVGQMNARFHLSKMSTLSYGGTALLENHHHDQNLLEGVISSSNNNKESDLQLPFVPTMTASTASNSNTKRTLSSMYWSNNSEEEDVNGTKRLGLDEDHHHHHHNNNNNNEGGGNSIATLLNQIPQTPSLHHQPMLSSYPYSIPGMNWYA 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5705g00004 354 MobiDBLite consensus disorder prediction 297 311 - -
Pral5705g00004 354 ProSiteProfiles NAC domain profile. 15 176 IPR003441 GO:0003677|GO:0006355
Pral5705g00004 354 MobiDBLite consensus disorder prediction 297 322 - -
Pral5705g00004 354 MobiDBLite consensus disorder prediction 1 20 - -
Pral5705g00004 354 SUPERFAMILY NAC domain 7 176 IPR036093 GO:0003677|GO:0006355
Pral5705g00004 354 MobiDBLite consensus disorder prediction 1 17 - -
Pral5705g00004 354 Pfam No apical meristem (NAM) protein 16 142 IPR003441 GO:0003677|GO:0006355
Pral5705g00004 354 Gene3D NAC domain 24 181 IPR036093 GO:0003677|GO:0006355
Pral5705g00004 354 PANTHER NAC TRANSCRIPTION FACTOR 56 15 209 - -
Pral5705g00004 354 FunFam NAC transcription factor 56 24 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5705g00004 Pral-Chr5705 21705 23159 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5705g00004 1 354 NAC Transcription Factor Family AT3G15510 51.715 3.32e-122 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral5705g00004 NAM 6.8e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5705g00004 - - gmx:100170710 504.597