Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5703g00001 ATGATGTTATCTTCTACGCCTTCTGCGATAGCGAGGAGCTCGCTGGAAGAAATGCTTGAATCAATCCGGCGGAGAGGAGAAGAAGAGAAGCCGGAGGACTTGCCGCCAGCATTGCCAACTCGTCCGACGTCGAGAGCACGGCTTCCCTCAGCGAGACGGTCGTTGCCGAATAAATTTAGGATTGAAGGTGATCAGAATGCAACAACAAGGTCCAAAAATAATTCCAATGCAAAGGCAAAAGAAGAGACCAAGAAGAAAGAAGGGGATGTGGGACATAGGAGAAAAGGAAGTTTTGCGAGCAAAAAGATGAAGCAAGACATGGAATCTCCTTATATCGTGACATCGGAAGAGAATATAAGCCAATCATCATCAGAGGACCCTGTTTCCGCATCTACTGCTTCCACAGCAACATCGGGGAAGATTCAGGAATTGGATGGTGATGACAACGTTGCTTATTACATAAAAACGAAACTAAGTGTTTGGTGTAGGCCGCCCAGTGGAAAGTGGGCACTAGGACAGATACAATCAACTTCAGGAGGAGAAGCTTTTGTTTCGCTCTCGCATGGAGATATTATGAAGGTGGCAAGATCAGAGATTTTACCAGCTAATCCAGATATTCTAGAGGGTGTGGATGATCTTATACAGCTTAGTTACTTAAATGAGCCCTCAGTTCTTCATAATCTCCGGTTTAGATATTCTCAGGACATGATATATAATAAGGCAGGACCGGTTTTAATTGCTCTCAACCCCTTCAAAGAGATCCAGATATATGGAAATGATTATATCTCGGCTTATAGGCAGAAGACTACGGACAGTCCACACGTTTTTGCTATGGCAGATGTGGCTTTTAATGAGATGATGAGAGACGAAGTGAACCAATCAATTATTATAAGTGGCGAGAGTGGATCCGGGAAGACAGAGACGGCAAAGTTTGCCATGAAATACTTAGCGGCTCTAAGTGGCAGCAGCTGCGGGGTAGAAAAGGAAGTCCTCCAGACGAATTGTATATTAGAAGCTTTTGGGAATGCGAAAACATCTAGGAATGACAACTCTAGCAGATTTGGGAAGTTGATTGAGATTCATTTCAGCACGCTGGGGAGGATATGTGGGGCCAAAATTCAAACCTTTCTGTTAGAAAAGTCAAGGGTTGTTCAACTGGCCAGCGGAGAGAGGACGTATCATATCTTTTATCAACTTTGTGCTGGTTCTTCGCCTGATCTTAAAGGGAGACTGAATCTTAAAGGTGCTAGTGAATACAAGTATCTCAATCAAAGTGACTGCATGAAAATTGATGGTATTGACGATACTAAGAAGTTTCATAAGCTAATGAAAGCACTGGATGATGTTCGAATTTGCAAAGAGGATCAAGAGATAGTCTTCAAGATGATTGCCGCAATACTGTGGCTGGGAAATATATCATTCCGAGTAACTGACAATGAAAATCACATTGAGGTTGCAGACGATGAAGCTGTTGCCAATGCTGCCCAGCTAATGGGTTGCAGTTCCCAGGATTTAATGGTAACTTTATCTACTCGGAAAATCCAAGCTGGCAAAGATACTATTTCCAAAAGATTAACGTTGTGGCAGGCAACTGACACAAGGGATGGATTGGCAAAGTTCATATATGCAAGCTTGTTTGACTGGCTTGTGGAACAAATCAACAAGTCACTTGAAGTGGGCAAACGTTGCACTGGGAGATCCATAAGTATCCTTGACATCTATGGGTTTGAGTCGTTCCAGAAAAACAGTTTTGAACAGTTTTGTATAAATTACGCCAATGAGAGGCTTCAACAACATTTCAATCGGCATCTGTTCAAACTTGAGCAGGATGACTATGAATTGGATGGCGTTGATTGGAACAAAGTAGATTTTGAGGACAATCAAGAGTGCTTGGATCTTTTTGAGAAGAAACCGCTGGGGCTGATCTCTCTGTTGGATGAGGAATCAAATTTCCCCAAGGCTACTGATCAAACATTCGCCAACAAAATTAGACAGCACCTGAATGCTAATCCTTGTTTCAAAGGGGAAAGAGGCAGAGCTTTTCGCGTTCGTCATTATGCTGGGGAGGTTTCGTACGACACAAATGGATTCCTAGAAAAGAACAGAGATCCGCTGCCTCCAGATTCCCTCAAGCTCCTGTCATCATGTAATTGTCAACTGCTGCAGTTGTTCTCCAAAATGATTGATCAATCTAAGCTGTCAAATTCCTCCCACGTAGGTGCCTCGGGTTCACAAAAGCAGAGTGTTGGGACAAAGTTCAAGGGCCAATTATTCAAGTTGATGAATCAGTTGGAGGGCACCACGCCTCACTTCATTCGCTGCATAAAGCCCAATACTAAGCACCTGGCTGGAATATATGATGAGGACCTTGTCTTACAACAGCTCAGGTGTTGTGGAGTTTTGGAGGTTGTTAGAATTTCAAGGGCTGGATATCCCACTCGTATGATGCATCAAGAGTTTGCCAGAAGGTATGGGTTTTTGCTTTCCGAGGCCAGCGTATCTCAGGATCCATTAAGCATCTCAGTTTCCGTTTTACAACAATTTAACATCCCTCCTGAAATGTACCAAGTCGGCTACACAAAACTGTATCTCCGAACCGGGCAGATTGGTGTCCTGGAGGATAGGAGGAAACAGATTATACTGGGAATACTTGGGGTTCAAAAATGGTTACGTGGTCATCAAGCTCGCCGCAACTTTCATGTCCTCAAGAATGGAGCAATAGCTTTACAATCAATTGTTCGTGGAGAGATTGTGAGAAAGACATATCATTCGATGAAGTCTGCATCTATTGCTTCTGAAAAGCTTCAGCAGACGCAGGCAATCACACGCTTACAATCTGTGATCCGGGGGTGGTTGGTTCGAAGGCGTGCTAGTAGTCTCCTCCATATGTTGAAGAAAGATAGTAAAAACGCTAAAGCTAAGCAAAAGTCACGTTTTAAGATGTCAGAAGTGAAGGATTTGAATAAAGAGCAAGTTCAGAATCTGCCATCAACTTTGACAGAACTCCAGAACCGGGTTGTCAAAGCCGAAGCAACTCTGAAGCAAAAGGAAGAGGAAAATACTGCGTTGAAGGAACAACTAAAACAATTTGAGACGAGGTGGATTGAGTACGAGATGAAGATGAAATCAATGGAACAGATGTGGCAAAAACAGATGACATCTTTACAAAGTCTTTCCGTTGCTAGGAGGAGCCTTGCTGCTGAGAATTCCACTGATCAACCTGGAAGATGCGATGCTATGTCACCTTGCTTCTATGACTCCGAAGATGCTACTTCCGTGGAATCCAGAACACCCGCGGGCAGTACACCTATCAAGTTTCCTAGCACTCCTTATGCGAATGGAGCAAGGAAAGAGGCTACTGATACTTTCAACGCAGTGAGCAATCTGATGAAAGAATTTGAGCAGCGGAAACAGACTTTTGATGATGATGCCAAAGCTCTACTCGCGGCTAGATCAGGGCAACCAGCTCACATGAATCCCAGCGAAGAACTCCGGCAGCTTAAACGCCGATTTGAAGGATGGAAGAAAGAATACAAGGGAAGATTACGGGAAACAAAAGCCAGGCTTTCTAAGACAGGCAGTCCAGAAGCAGAAATTAGTTGTCAAAACTGGTGGGGCAAGATAAGCTCAAGAGGACTATAG 3642 0.4374 MMLSSTPSAIARSSLEEMLESIRRRGEEEKPEDLPPALPTRPTSRARLPSARRSLPNKFRIEGDQNATTRSKNNSNAKAKEETKKKEGDVGHRRKGSFASKKMKQDMESPYIVTSEENISQSSSEDPVSASTASTATSGKIQELDGDDNVAYYIKTKLSVWCRPPSGKWALGQIQSTSGGEAFVSLSHGDIMKVARSEILPANPDILEGVDDLIQLSYLNEPSVLHNLRFRYSQDMIYNKAGPVLIALNPFKEIQIYGNDYISAYRQKTTDSPHVFAMADVAFNEMMRDEVNQSIIISGESGSGKTETAKFAMKYLAALSGSSCGVEKEVLQTNCILEAFGNAKTSRNDNSSRFGKLIEIHFSTLGRICGAKIQTFLLEKSRVVQLASGERTYHIFYQLCAGSSPDLKGRLNLKGASEYKYLNQSDCMKIDGIDDTKKFHKLMKALDDVRICKEDQEIVFKMIAAILWLGNISFRVTDNENHIEVADDEAVANAAQLMGCSSQDLMVTLSTRKIQAGKDTISKRLTLWQATDTRDGLAKFIYASLFDWLVEQINKSLEVGKRCTGRSISILDIYGFESFQKNSFEQFCINYANERLQQHFNRHLFKLEQDDYELDGVDWNKVDFEDNQECLDLFEKKPLGLISLLDEESNFPKATDQTFANKIRQHLNANPCFKGERGRAFRVRHYAGEVSYDTNGFLEKNRDPLPPDSLKLLSSCNCQLLQLFSKMIDQSKLSNSSHVGASGSQKQSVGTKFKGQLFKLMNQLEGTTPHFIRCIKPNTKHLAGIYDEDLVLQQLRCCGVLEVVRISRAGYPTRMMHQEFARRYGFLLSEASVSQDPLSISVSVLQQFNIPPEMYQVGYTKLYLRTGQIGVLEDRRKQIILGILGVQKWLRGHQARRNFHVLKNGAIALQSIVRGEIVRKTYHSMKSASIASEKLQQTQAITRLQSVIRGWLVRRRASSLLHMLKKDSKNAKAKQKSRFKMSEVKDLNKEQVQNLPSTLTELQNRVVKAEATLKQKEEENTALKEQLKQFETRWIEYEMKMKSMEQMWQKQMTSLQSLSVARRSLAAENSTDQPGRCDAMSPCFYDSEDATSVESRTPAGSTPIKFPSTPYANGARKEATDTFNAVSNLMKEFEQRKQTFDDDAKALLAARSGQPAHMNPSEELRQLKRRFEGWKKEYKGRLRETKARLSKTGSPEAEISCQNWWGKISSRGL 1213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5703g00001 1213 Gene3D - 883 931 - -
Pral5703g00001 1213 Pfam Myosin head (motor domain) 210 865 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pral5703g00001 1213 MobiDBLite consensus disorder prediction 17 35 - -
Pral5703g00001 1213 ProSiteProfiles IQ motif profile. 937 966 IPR000048 GO:0005515
Pral5703g00001 1213 Coils Coil 999 1033 - -
Pral5703g00001 1213 ProSiteProfiles IQ motif profile. 902 931 IPR000048 GO:0005515
Pral5703g00001 1213 Pfam IQ calmodulin-binding motif 885 900 IPR000048 GO:0005515
Pral5703g00001 1213 Pfam IQ calmodulin-binding motif 938 956 IPR000048 GO:0005515
Pral5703g00001 1213 ProSiteProfiles Myosin motor domain profile. 208 877 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pral5703g00001 1213 SMART iq_5 878 900 IPR000048 GO:0005515
Pral5703g00001 1213 SMART iq_5 901 923 IPR000048 GO:0005515
Pral5703g00001 1213 SMART iq_5 936 958 IPR000048 GO:0005515
Pral5703g00001 1213 SMART MYSc_2a 202 878 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pral5703g00001 1213 Coils Coil 970 990 - -
Pral5703g00001 1213 CDD MYSc_Myo8 222 865 IPR036022 -
Pral5703g00001 1213 MobiDBLite consensus disorder prediction 111 140 - -
Pral5703g00001 1213 MobiDBLite consensus disorder prediction 1 140 - -
Pral5703g00001 1213 Gene3D - 579 767 - -
Pral5703g00001 1213 FunFam Unconventional myosin-XIX 579 767 - -
Pral5703g00001 1213 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 929 IPR027417 -
Pral5703g00001 1213 MobiDBLite consensus disorder prediction 75 102 - -
Pral5703g00001 1213 Gene3D - 811 878 - -
Pral5703g00001 1213 Gene3D Myosin VI head, motor domain, U50 subdomain 448 556 - -
Pral5703g00001 1213 ProSiteProfiles IQ motif profile. 882 908 IPR000048 GO:0005515
Pral5703g00001 1213 FunFam Myosin heavy chain 391 447 - -
Pral5703g00001 1213 Gene3D Kinesin motor domain 207 810 IPR036961 -
Pral5703g00001 1213 Gene3D - 391 447 - -
Pral5703g00001 1213 PRINTS Myosin heavy chain signature 292 317 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pral5703g00001 1213 PRINTS Myosin heavy chain signature 335 362 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pral5703g00001 1213 PRINTS Myosin heavy chain signature 620 648 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pral5703g00001 1213 PRINTS Myosin heavy chain signature 238 257 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pral5703g00001 1213 PRINTS Myosin heavy chain signature 567 595 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pral5703g00001 1213 PANTHER MYOSIN 201 1196 - -
Pral5703g00001 1213 FunFam Myosin IE heavy chain 448 556 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5703g00001 Pral-Chr5703 12890 22472 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5703g00001 1 1207 Myosins gene family AT5G54280 61.345 0.0 1537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5703g00001 K10357 - qsa:O6P43_029040 1680.23