Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5702g00001 ATGGATTGTGGGTGTAGTAAGAATAATAAGAATGGCGGGGATGGTGGTGATCATGGTGGTCAGAGAGGGCCTTGTGGGGCGTGCAAGTTCCTTCGACGAAAATGCGTGAGGGGATGCGTGTTTGCACCCTACTTCGACTCCGATCAAGGCACGGCTCACTTCGCGGCAGTGCACAAGGTATTCGGAGCCAGCAACGCCGCCAAGCTTCTGCTGCGAATCCCTCCTCACCACCGTCTGGACGCCGTCATCACTCTCTCCTACGAGGCTCTCTCTAGGGCTCGAGATCCCGTCTATGGCTGCGTCGCCCACATCTTCGCCCTTCAACAACAGGTGATGAACTTGCAGGCAGAGTTAGCTTATGTGCAAGCTCGTCTTTCAACACTGCAGCGTCTGCCAGCGGCAGGGGTCGGAGCTCTACCCCAACTTCAAACC 432 0.5648 MDCGCSKNNKNGGDGGDHGGQRGPCGACKFLRRKCVRGCVFAPYFDSDQGTAHFAAVHKVFGASNAAKLLLRIPPHHRLDAVITLSYEALSRARDPVYGCVAHIFALQQQVMNLQAELAYVQARLSTLQRLPAAGVGALPQLQT 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5702g00001 144 PANTHER LOB DOMAIN CONTAINING PROTEIN 21 129 - -
Pral5702g00001 144 Coils Coil 111 131 - -
Pral5702g00001 144 ProSiteProfiles LOB domain profile. 23 125 IPR004883 -
Pral5702g00001 144 Pfam Lateral organ boundaries (LOB) domain 24 122 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5702g00001 Pral-Chr5702 4337 9086 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5702g00001 15 132 AS2 family AT4G00210 77.119 3.66e-63 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pral5702g00001 LOB 1.4e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5702g00001 - - pcin:129289888 231.876