Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5701g00002 ATGAGTACGAGCTCCACCAGTAACGTTACTGGTAGTGTTGGTGGAGGAGGAGGAGGATGCGGTGGGGGAGGAGGAGGTGGTGGTGGTAGCGGCGGCGGTGGAGGGCCGTGCGGTGCCTGCAAGTTTCTGAGAAGGAAGTGCGTGCCGGGGTGTATCTTCGCGCCGTACTTCGACTCCGAGCAAGGCGCGACGCACTTCGCGGCGGTGCACAGGGTGTTCGGAGCAAGCAACGTGTCGAAGCTGCTTCTGAATATTCCGGTGCACAAGCGGCTGGACGCGGTGGTGACGATTTGCTTCGAGGCTCAGGCTCGGCTGAGAGATCCTGTGTATGGATGTGTCGCCAACATCTTCGCTCTTCAGCAACAGGTTGTGAGCCTACAAGCAGAACTTTCATACTTGCAAGGTCACCTTGCTACATTAGAGCTGCCCCAACCGCCACCTCCTCCGCTACCACAAGCAACACCGATGCCGACAACTCTCTCAATCGGTAACGTCCCGTCCGGCATAGCCACTTCTCTTCCGGTAACATATGATTTATCTTCTCTCTTTGATCCGATGGCCCAAAGTCCTTGGGCCTTGCCACACCGGCCCATGGATTCCCACCAATTTGGATCGAGTGGCTTGCCGACAATAGGCCGTGGTAGTGGTAGTGGCAGTAGTAGCGGTAGCGGTGATCTTCATGCCCTAGCAAGAGAACTGCTCAACAGACATGGATCTCCTCCATCTTCAGCACCCATGGCTTGCTCTAAAGCTTCATCTTCATCACCATCATCACTTTCCAAATGA 786 0.556 MSTSSTSNVTGSVGGGGGGCGGGGGGGGGSGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGATHFAAVHRVFGASNVSKLLLNIPVHKRLDAVVTICFEAQARLRDPVYGCVANIFALQQQVVSLQAELSYLQGHLATLELPQPPPPPLPQATPMPTTLSIGNVPSGIATSLPVTYDLSSLFDPMAQSPWALPHRPMDSHQFGSSGLPTIGRGSGSGSSSGSGDLHALARELLNRHGSPPSSAPMACSKASSSSPSSLSK 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5701g00002 261 MobiDBLite consensus disorder prediction 193 261 - -
Pral5701g00002 261 ProSiteProfiles LOB domain profile. 35 137 IPR004883 -
Pral5701g00002 261 MobiDBLite consensus disorder prediction 245 261 - -
Pral5701g00002 261 Pfam Lateral organ boundaries (LOB) domain 36 134 IPR004883 -
Pral5701g00002 261 MobiDBLite consensus disorder prediction 203 224 - -
Pral5701g00002 261 PANTHER LOB DOMAIN CONTAINING PROTEIN 34 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5701g00002 Pral-Chr5701 9507 15731 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5701g00002 37 244 AS2 family AT2G45420 62.385 1.75e-75 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pral5701g00002 LOB 1.9e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5701g00002 K21994 - cave:132188187 292.737