Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5700g00039 ATGGATGACAGTGCCAAAATTGAACGACTACTTTATTTGCTATACAATGCTCTGCCCGTTCTTAGGCATATTTATAAGGAGCAGAGCTCTGAGCTAGACACTGAAGCAAAAATGAGAGGTTATCAACTGCAAGAAATTAACATAACAAGGACTAAGTTAGATGGAAGTGAGCGTATGTACTGCGACAATTGCAACACATCGATTGTTGGATTTTACAGAAGCTGTCCCAACCTCGGTTGCTCTTACGACCTATGTCTTGCCTGCTGTCAAGAGCTTAGAAATGGTTGCCAACCTGGAGGCGTAGAAGCTGAAACATTGCGTGAACAGTTTGCAGAGAAAGATGGAAACCAAGATTCGATAAGTAGCAAGACTCGTACGGAAGGATATGGTTGGGAAAGCCAACTCTTACCTAATGTGTTTGATGTCCAAACTGATGGAACTTCTCCATCTCCTGAATGGCGAGCTAATAGTGATGGTAACATTCCATGTCCTCCAAAACAGCATGGAGGTTGTGGCACTGCGTTGCTAGAACTGAGACGCACTTTCAAAGCTGATTGGGTGGTGAAGCTGTTAAAGAATGCAGAGGACCTCACAAGAGCCTACAGACACATGGACGTTGATGTTTCTGCGAAATGCTCTTTATGCTGGCCAAATTTGGTTGAAGGGAAATCCAATTATGAGGTCAGGCAGGCAGCATCAAGGGATGATGCTCAAGATAATTTCTTATACAGCCCGAATGCCCTTGACACGTCTGATGACGAAGTTGAGCATTTCCAGAGGCACTGGTTAAGGGGAGAACCTGTGATTGTGAGAAATGTTCTGGACAGGACATCTGGCCTTAGTTGGGAACCAATGGTTATGTGGAGGGCTTTCAGAGAAACAGGTTCTAGAATGAAGTATAAAGAGGAAACACGAAGTGTAAAGGCCATCGATTGCTTTGATTGGTGTGAGGTGGAAATCAATATTCACCAATTTTTTGTAGGCTACCTAGAGGGTCGAATGCATAAGGATAGATGGCCAGAAATTCTGAAATTGAAAGATTGGCCTTCATCAACCTGGTTTGAAGAGCGTTTGCCCAGGCATGGTGCTGAGTTTCTCAGAGCTCTGCCCTACAGGGACTACACTGACCCAAAATCAGGCCTCTTGAATCTTGCCAGTAAACTTCCTGATGGCTCACTAAAACCAGATTTGGGACCCAAAACGTATATTGCTTATGGGTTTCTTGACGAGCTTGGTAGAGGTGATTCGGTGACAAAACTCCACTGTGATGTGTCTGATGCGGTTAATATACTGACCCACACAACCAAGGTAAATATAGGTGCTTGGCAACAAGAAAGCATAAAAGAATTGCGGGAGAAATATGCAAAAGAAGACATGCAGGAACTATCCTGTGAAGCACGCAGTGATATTGATGAAGAACCCAAAGCAAATGATGGGAAGCCTGAAGATGGAGTTAACAGTTTTTCTTCTGGTCGCCAAGTAGATGAACATATTTCATCAGCATCGGAAGGCTCAACTGTGAAGCCAGAAATTTCATCAGCAGTGAAAGAGTCAACTATGAAGTTAGAAAGTTCATCGGCATCGGAAGACTTTACTGTGAAGATAAACATTTCATCAGCATCAGATGGCTCAACCGCGAAGTTAGAAACAACAGACACAGAACAATGTGTTGAGAGCAGAAACTGCTCCGCCTCCTGCAGAAATGTTGCCGAAAGAAGTTTCTCTGGAGAAGATGATGTTAATATAATATCTGCTGAAGTTTCAGATCATACCAAGACTTTCGGACGGAAACATGAACATACTCAATCTGCGTGTAATTTAACCTCTAATTGTAAGAGCAATGTTAATGACAGAACGAAGACTGATTTTCTTGGCATTTTGTCTGATGATCCAGAGTCCCAAAAATCAAAACAAGGTCTGGTGAAAGATTCTGTAGAAACTAATCATAAAGCTGCAGTCGTCTATGGTGGTGCTGTTTGGGATATCTTCCGTCGTCAAGATGTACCAAAAGTAATGGAGTATTTGAGGAAGCATAAAAAGGAATTCCGTCATATCAGCAATCATTCTTTAAGTTCTGTTATACATCCCATTCATGATCAGACATTTTTCTTTAATGAGAAGCATAAGAAACAATTGAAACAAGAGTTTGGTGTTGAACCCTGGACTTTCGAGCAACATCTTGGTGAGGCCGTTTTCATTCCCGCTGGATGTCCCCACCAAGTGAGAAATAGACAATCTTGTATAAAAGTGGCACTTGATTTTGTTTCCCCGGAAAATGTTGAAGAATGTTTACGACTAACTGAGGAGTTTCGTTTGCTCCCAAAGAAACACACAGCCAAGGAGGATAAATTGGAGGTTAAAAAGATGACACTTTATGCTGTAAGTTCGGCTGTTAGAGAAATCAAAAGACTGATGAAGTCTGCCGATTGA 2430 0.4222 MDDSAKIERLLYLLYNALPVLRHIYKEQSSELDTEAKMRGYQLQEINITRTKLDGSERMYCDNCNTSIVGFYRSCPNLGCSYDLCLACCQELRNGCQPGGVEAETLREQFAEKDGNQDSISSKTRTEGYGWESQLLPNVFDVQTDGTSPSPEWRANSDGNIPCPPKQHGGCGTALLELRRTFKADWVVKLLKNAEDLTRAYRHMDVDVSAKCSLCWPNLVEGKSNYEVRQAASRDDAQDNFLYSPNALDTSDDEVEHFQRHWLRGEPVIVRNVLDRTSGLSWEPMVMWRAFRETGSRMKYKEETRSVKAIDCFDWCEVEINIHQFFVGYLEGRMHKDRWPEILKLKDWPSSTWFEERLPRHGAEFLRALPYRDYTDPKSGLLNLASKLPDGSLKPDLGPKTYIAYGFLDELGRGDSVTKLHCDVSDAVNILTHTTKVNIGAWQQESIKELREKYAKEDMQELSCEARSDIDEEPKANDGKPEDGVNSFSSGRQVDEHISSASEGSTVKPEISSAVKESTMKLESSSASEDFTVKINISSASDGSTAKLETTDTEQCVESRNCSASCRNVAERSFSGEDDVNIISAEVSDHTKTFGRKHEHTQSACNLTSNCKSNVNDRTKTDFLGILSDDPESQKSKQGLVKDSVETNHKAAVVYGGAVWDIFRRQDVPKVMEYLRKHKKEFRHISNHSLSSVIHPIHDQTFFFNEKHKKQLKQEFGVEPWTFEQHLGEAVFIPAGCPHQVRNRQSCIKVALDFVSPENVEECLRLTEEFRLLPKKHTAKEDKLEVKKMTLYAVSSAVREIKRLMKSAD 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5700g00039 809 Gene3D Cupin 245 479 - -
Pral5700g00039 809 Gene3D Cupin 545 780 - -
Pral5700g00039 809 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 2 807 IPR045109 GO:0032454|GO:0033169
Pral5700g00039 809 SMART cupin_9 358 771 IPR003347 -
Pral5700g00039 809 MobiDBLite consensus disorder prediction 483 512 - -
Pral5700g00039 809 MobiDBLite consensus disorder prediction 461 480 - -
Pral5700g00039 809 MobiDBLite consensus disorder prediction 461 512 - -
Pral5700g00039 809 SUPERFAMILY Clavaminate synthase-like 255 802 - -
Pral5700g00039 809 ProSiteProfiles JmjC domain profile. 377 771 IPR003347 -
Pral5700g00039 809 Pfam JmjC domain, hydroxylase 658 754 IPR003347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5700g00039 Pral-Chr5700 201206 206538 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Pral5700g00039 JmjC 1.1e-16 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5700g00039 K15601 - cave:132187182 919.457