Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5700g00024 ATGGAAAGGAATATAGAACCAAACAATAATAATTCATGCGCAAAAGAAGTAGGGTTAGAGAAGAAGGTAAGACCACAAGAACAACTGAATTGTCCAAGGTGCAATTCTACAAACACCAAGTTCTGCTACTACAACAACTATAGCCTCACACAACCCAGATACTTCTGCAAAACTTGCAGAAGGTATTGGACTGAGGGTGGGTCCCTCAGAAATGTCCCTGTTGGAGGAGGTTCCAGAAAGAACAAGAAGCTCATTACTAATAATCCTTCATCTTCATCATCAAAGGTTCTTCCTGACTTGAATCCACCAACAACTACTGTTGTTCCTTCTTCTTCTTCTACTTCTTCTCAGAATCCTAAAATATTAATGCAAGGAGGCCGGGATCTTAATCTGTCTTTCCCACCTGTCATGGAGAATTATGACCACCACCACCACCACCACCACCATCATGGCCTTAGTTATCAAAGCTCTTCTTCTTCTTCTTCAACAACTTCTTCTTCTTCTACTTCTGCTTTGGAGCTACTAAGAGCAGGCATGGCTTCTAGGGGTTTGAATAATCACCCTTTCGCTCATAATCCGATATTGATGCCAAACTCTAATAATAATGCGCTTTTCCCTTCTGGGTTTAGTCCCATGCATGAGGTTAAGCCAAGCCTTGGATTTTCAGTGGATGATCATCAAGGACTTCGAAGCAGATATGGTGTTCAAGAGAATAATATGAATGCTAGCACTGGAGGCAGATTATTGTTTCCTTTTGGAGATGTCAAGCCGATTCCAGGAGCTCATGAAGTGGAAGAAAATAAAGAACACGCTGGTGGGAATTCATCTTCTGGGTATTGGACTGGTATGATTGGTGAAGGATCCTGGTAA 870 0.4184 MERNIEPNNNNSCAKEVGLEKKVRPQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKKLITNNPSSSSSKVLPDLNPPTTTVVPSSSSTSSQNPKILMQGGRDLNLSFPPVMENYDHHHHHHHHHGLSYQSSSSSSSTTSSSSTSALELLRAGMASRGLNNHPFAHNPILMPNSNNNALFPSGFSPMHEVKPSLGFSVDDHQGLRSRYGVQENNMNASTGGRLLFPFGDVKPIPGAHEVEENKEHAGGNSSSGYWTGMIGEGSW 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5700g00024 289 ProSitePatterns Zinc finger Dof-type signature. 31 67 IPR003851 GO:0003677|GO:0006355
Pral5700g00024 289 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 20 180 IPR045174 GO:0003700|GO:0006355
Pral5700g00024 289 MobiDBLite consensus disorder prediction 153 170 - -
Pral5700g00024 289 MobiDBLite consensus disorder prediction 81 123 - -
Pral5700g00024 289 MobiDBLite consensus disorder prediction 264 289 - -
Pral5700g00024 289 Pfam Dof domain, zinc finger 27 83 IPR003851 GO:0003677|GO:0006355
Pral5700g00024 289 ProSiteProfiles Zinc finger Dof-type profile. 29 83 IPR003851 GO:0003677|GO:0006355
Pral5700g00024 289 MobiDBLite consensus disorder prediction 73 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5700g00024 Pral-Chr5700 88692 90808 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5700g00024 21 289 C2C2-Dof Transcription Factor Family AT3G61850 49.296 8.53e-65 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Pral5700g00024 zf-Dof 2.5e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5700g00024 - - gmx:778110 296.975