Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5700g00016 ATGGATTCTGGGGTTGAATCGCCAGAAAACGATGGAACAGGGACAAAGGAGCCTGCTCAGTTCGAGGAGGATTTTGCAGAGAAAGACCCAACTGGTCGATATATACGGTACAATGAAATCTTAGGCAAGGGTGCTTTCAAAACTGTGTATGATTCTGATACTTTATCTCTTATTATTGTTGAATTACTATTGTTGCTTTATGTTAATCTATTTTGCTCTCTCACTGGCAGTTATAGGGCCTTTGATGAAGTCGATGGAATCGAAGTTGCATGGAACCAAGTTAGGATTGATGACCTTTTGCAGTCAGAAGTAGATCTAGCAAAACTGTACTCTGAAGTTCACATACTGAAGTCTTTGAAACATGAAAATATTATGAAGTTCTATCATTCTTGGGTTGATGATAAAAACAAAACTGTTAACATGATCACTGAGCTATTCACGTCTGGAACTTTAAGACAATACCGTAGGAAGCATAAAAATGTTGACATGAAGGCCATCAAAGGTTGGGCTAGGCAGATTCTCCACGGTTTAGCCTACATCCATAGTCAAAAGCCTCCTATTATTCACAGAGACCTGAAATGTGACAACATCTTTGTGAATGGAAACCATGGAGAAATTAAGATAGGAGACCTAGGGTTGGCAACTGTGATGCAGCAACCAGTTGCTCGAAGTGTCATTGGGACTCCTGAATTTATGGCTCCTGAGCTTTATGAAGAGGAATACAATGAGCTTGTTGACATCTATTCTTTTGGGATGTGCATATTGGAGATGGTTACTTTTGAGTATCCCTATAGTGAATGCAAAAATCCAGCTCAAATCTATAAGAAAGTTACCTCTGGTATCAAGCCAGCTTCTCTTAAGAAGGTGAATGAACCCCAAATTAGAGGGTTTATTGAAAAATGCTTGGTTCCAGCATCTCAGAGATTGTCTGCAGAGGAGCTTCTCAAAGACCCATTTCTGCAAGTTGAGAATCCAAAGAATCCAGCCCGAGATCCCTTACAGTTGCCTCCTCAAACTCCAAGATCTATAGATTGGTCCAGATCTGGTCCTTTATCTATGGACATAGATGCTGACTATAAACAGATTTCTATGAGTACCTGTACTGAAAGCAACTGTGGGAGTCCTCAGTCTCCAGTTCTAGAATTCCAGAGGACATCTAAGGAGAATGAATTTAGGTTGAGAGGGACAAAAAATGATGACAGATCAGTATCACTGACCTTACGTATTGCGGATTCCTCTGGTCGAGTTAGGAATATACATTTTCTCTTTTATCTTGATTCAGACACTGCAGTATCAGTGGCCTCAGAGATGGTTGAACAACTGGAGTTAGCAGAACATGATGTGACCTTCATTGCAGAGCTTATTGATCATTTGATGACAAAACTTCTACCTGGCTGGAAACCTTCATCTGATTATTCCTCAAGTGAAGGAATAAGCCTCAATGGCGGATCCTCAACACTGGTAGATGTCCAGACTCAAACAAGTCTATGGGATTCCATCCTAACCATTGATTCTGCTGGACTAATTATTTACCAAGATGATGTGTTAGGGCCGATTACTGGTGATCAAAAAGGTGAGGTTACACTTGAGGAAGGCTGCTTGCTGGGTGGCACTTTAATTAATGCTACTCTGCATGGTGAGTGTAATTCTTCTCCCACTTTGGCTGACTTGGAATATCAATATTCCCAAGGATTCACAACCTCTGGGCTAGTTGCTAAAGATTCAGCTACAAAAATTGACAAGTTTCTCGATTTCAATGGGAGCTCTAGATCCTTGAGCTGGTCTATCTCTGAACTGGATCTTGGGGATACATATCTTGACGCTTGCAAATTGCAGAGAACAACAGATAACGGTGTGGGGGAAGGCATTGTGATAAACAACTTTACGAAGAATGAAACGATTCCACCATTTAATGGAACATGCAATGCTTTTAGCTTGACAAGCAGCTGTTCTTCTTTGTCTTTAGCAGAGGAGAATGCAGATTCTGAGCTAAAGTTGGAAATTGATGCAATTGAGGCTTTCTATCGTGAACAGTTACAAGAACTCTCTAGAAGGAAGTTGGTGCATTTGGATCTCATCAGAAAGAGATGGATGGCTAAGAAAAAATTGGCTGTTCATTGA 2121 0.4069 MDSGVESPENDGTGTKEPAQFEEDFAEKDPTGRYIRYNEILGKGAFKTVYDSDTLSLIIVELLLLLYVNLFCSLTGSYRAFDEVDGIEVAWNQVRIDDLLQSEVDLAKLYSEVHILKSLKHENIMKFYHSWVDDKNKTVNMITELFTSGTLRQYRRKHKNVDMKAIKGWARQILHGLAYIHSQKPPIIHRDLKCDNIFVNGNHGEIKIGDLGLATVMQQPVARSVIGTPEFMAPELYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIYKKVTSGIKPASLKKVNEPQIRGFIEKCLVPASQRLSAEELLKDPFLQVENPKNPARDPLQLPPQTPRSIDWSRSGPLSMDIDADYKQISMSTCTESNCGSPQSPVLEFQRTSKENEFRLRGTKNDDRSVSLTLRIADSSGRVRNIHFLFYLDSDTAVSVASEMVEQLELAEHDVTFIAELIDHLMTKLLPGWKPSSDYSSSEGISLNGGSSTLVDVQTQTSLWDSILTIDSAGLIIYQDDVLGPITGDQKGEVTLEEGCLLGGTLINATLHGECNSSPTLADLEYQYSQGFTTSGLVAKDSATKIDKFLDFNGSSRSLSWSISELDLGDTYLDACKLQRTTDNGVGEGIVINNFTKNETIPPFNGTCNAFSLTSSCSSLSLAEENADSELKLEIDAIEAFYREQLQELSRRKLVHLDLIRKRWMAKKKLAVH 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5700g00016 706 ProSitePatterns Serine/Threonine protein kinases active-site signature. 187 199 IPR008271 GO:0004672|GO:0006468
Pral5700g00016 706 SUPERFAMILY Protein kinase-like (PK-like) 78 363 IPR011009 -
Pral5700g00016 706 CDD STKc_WNK 33 320 - -
Pral5700g00016 706 Pfam Protein kinase domain 79 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5700g00016 706 MobiDBLite consensus disorder prediction 1 23 - -
Pral5700g00016 706 Gene3D Transferase(Phosphotransferase) domain 1 146 325 - -
Pral5700g00016 706 FunFam Probable serine/threonine-protein kinase WNK1 71 144 - -
Pral5700g00016 706 SMART serkin_6 35 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5700g00016 706 Gene3D - 401 474 - -
Pral5700g00016 706 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 17 475 - -
Pral5700g00016 706 FunFam probable serine/threonine-protein kinase WNK9 146 325 - -
Pral5700g00016 706 ProSiteProfiles Protein kinase domain profile. 35 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5700g00016 706 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 403 458 IPR024678 GO:0004674|GO:0005524
Pral5700g00016 706 Gene3D Phosphorylase Kinase; domain 1 19 144 - -
Pral5700g00016 706 MobiDBLite consensus disorder prediction 321 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5700g00016 Pral-Chr5700 60652 65097 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5700g00016 22 463 MAP Kinase Kinase Kinase AT5G41990 59.465 9.49e-176 512
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Pral5700g00016 Pkinase 1.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5700g00016 K08867 - qsa:O6P43_027404 847.81