Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5697g00003 ATGGGGAAGAAGGGAGGTACCTCCTGGTTGACCGCTGTGAAAAGGGCATTTAGATCTCCAACCAAAGACACTGACAAAAGGAACCAAGAAGAAGACGAAGACAAGAAAAGAGAAAAACGACGATGGCTTTTCAGAAAAACAGCGAATCAGGACGCTGCGGTGAGTATTCAGCACACCCCAACAAAGGAGAACCTCGATTCGGCTGCCACAACTGCTGGTCGTGCTCCTGTGCCGACGGTGATGGCGACGGATCAGAACAATGCGCTTGCCGCGGCGGTAGCAAAGGCTGAAGCGGCCATGGTCACCGCTCAGGCAGCAGCGGAAGCTGCTAGGTTTAAAAGGCCTTCGAATCAAGCCAGGGAGCACTATGCTGCTACGGTGATTCAAACTGCTTTTAGAGGATACCTTGCAAGGAGGGCACTTCGAGCGCTTAAAGGGTTGGTGAAATTGCAAGCTTTGGTGAGGGGTCATAATGTTCGGAAGCAGGCAAAAATGACCCTTCGGTGCATGCAGGCTCTGGTTCGAGTGCAAGCCAGAGTGCTTGACCAGCGCTCGCGGTTCTCCCACGAGACCAGTAGTAGAAAATCCACATTCAGTGACACCAACAGCGTTTGGGAGTCGCGGTATCTTCAGGATATTTCAGACAGGAGATCAATGTCAAAAGAAGGAAGCAGTATTGCAGACGACTGGGATGAACGCCCACACACAGTTGAGGAACTTAAAGCCATGTTACAGCAGAGGAAAGAAGCAGCAGCTATGAAGCGTGACAAGTCATTGTCTCGAGCTTTCTCGCAACAGCTTTTGAGAAATGGTTGGAACTCATCGATTGGAAATGAAGATGAACTGGAAGAGAGACCGAAATGGCTGGACAGGTGGATGGCTTCAAAGCCATGGGAGACCAGAGGAAGAGCTTCGACTGATCAAAGAGACACCATTAAAACTGTAGAAATTGACACTTCTCAGCCTTACTCATATCTGGGATCTAACTACAGAAGATCACATCCAAATTATCAATATAACCCACACCAACCCCAGAGACATTCAGTGGCTTCCCCACTCCACAGAAGCCACCCAAATAGCTCTTTTCATCAATCTCCTGCAACCCCATCTCCTGCAAAATCACGGCCTATCCAAGTCCGGTCTGCGAGCCCTCGATGTGGTAGGGAAGATAGAAGCTACCATACATCTCAAACCCCAAGTTTAAGGTCCAATTACCATTATTCTGGAAGTCTGTACCAAAATGGAAGGGTTGGAACGAGTATCAGTGGCGGGGGTACGTTGCCTAATTACATGGCTGCAACTGAGTCTGCAAAGGCCCGAGTTCGGTCTCAGAGCGCTCCGAGGCAGAGGCCATCTACGCCGGAGAGGGACAGGGCAGGATCAATAGCAAAGAAGAGGCTTTCATTCCCCAATGCTCCAGACCCTTATGGTGTTGCAATGGGTTATGGAAATTATGGGCATAATTTAAGAAGTCCAAGCTTCAAAAGCGTGAGTGCTTCACACTTTGGGTTGGAGCAGCAATCCAATTATTCTTCTTGCTACACCGAGAGTCTTGGTGGCGAGATTTCTCCATCTTCAACTGGTGATCTTAGAAGGTGGTTGAGATGA 1608 0.4919 MGKKGGTSWLTAVKRAFRSPTKDTDKRNQEEDEDKKREKRRWLFRKTANQDAAVSIQHTPTKENLDSAATTAGRAPVPTVMATDQNNALAAAVAKAEAAMVTAQAAAEAARFKRPSNQAREHYAATVIQTAFRGYLARRALRALKGLVKLQALVRGHNVRKQAKMTLRCMQALVRVQARVLDQRSRFSHETSSRKSTFSDTNSVWESRYLQDISDRRSMSKEGSSIADDWDERPHTVEELKAMLQQRKEAAAMKRDKSLSRAFSQQLLRNGWNSSIGNEDELEERPKWLDRWMASKPWETRGRASTDQRDTIKTVEIDTSQPYSYLGSNYRRSHPNYQYNPHQPQRHSVASPLHRSHPNSSFHQSPATPSPAKSRPIQVRSASPRCGREDRSYHTSQTPSLRSNYHYSGSLYQNGRVGTSISGGGTLPNYMAATESAKARVRSQSAPRQRPSTPERDRAGSIAKKRLSFPNAPDPYGVAMGYGNYGHNLRSPSFKSVSASHFGLEQQSNYSSCYTESLGGEISPSSTGDLRRWLR 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5697g00003 535 MobiDBLite consensus disorder prediction 513 535 - -
Pral5697g00003 535 Gene3D - 118 173 - -
Pral5697g00003 535 FunFam IQ-domain 11 120 171 - -
Pral5697g00003 535 Pfam IQ calmodulin-binding motif 124 142 IPR000048 GO:0005515
Pral5697g00003 535 Pfam IQ calmodulin-binding motif 148 164 IPR000048 GO:0005515
Pral5697g00003 535 ProSiteProfiles IQ motif profile. 145 172 IPR000048 GO:0005515
Pral5697g00003 535 SMART iq_5 143 164 IPR000048 GO:0005515
Pral5697g00003 535 SMART iq_5 120 142 IPR000048 GO:0005515
Pral5697g00003 535 MobiDBLite consensus disorder prediction 1 71 - -
Pral5697g00003 535 PANTHER IQ-DOMAIN 5-RELATED 1 471 - -
Pral5697g00003 535 MobiDBLite consensus disorder prediction 50 68 - -
Pral5697g00003 535 MobiDBLite consensus disorder prediction 18 46 - -
Pral5697g00003 535 ProSiteProfiles IQ motif profile. 121 149 IPR000048 GO:0005515
Pral5697g00003 535 MobiDBLite consensus disorder prediction 315 377 - -
Pral5697g00003 535 MobiDBLite consensus disorder prediction 299 314 - -
Pral5697g00003 535 MobiDBLite consensus disorder prediction 393 407 - -
Pral5697g00003 535 Pfam Protein of unknown function (DUF4005) 383 484 IPR025064 -
Pral5697g00003 535 MobiDBLite consensus disorder prediction 299 407 - -
Pral5697g00003 535 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 119 165 IPR027417 -
Pral5697g00003 535 MobiDBLite consensus disorder prediction 434 470 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5697g00003 Pral-Chr5697 47252 50022 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5697g00003 1 535 IQD Protein Family AT1G01110 57.527 2.70e-178 511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5697g00003 - - gmx:100799284 782.326