Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5697g00002 ATGCAGGAGAACATGAGCATCTCTGTGAACGGACAATCCCAGGTGCCTCCTGGTTTTCGGTTCCACCCAACCGAAGAGGAGCTTTTGCAGTACTACCTCAGGAAGAAGGTCTGCTACGAGAAGATCGACCTCGACGTTATTCGCGATGTCGATCTCAACAAGCTCGAGCCCTGGGATATACAAGAGAAGTGCAAAATAGGAACCACCCCACAGAACGATTGGTACTTCTTCAGCCACAAAGACAAGAAGTATCCCACCGGAACTCGAACAAACCGGGCCACGGCTGCCGGATTCTGGAAGGCGACGGGGCGGGACAAGGTGATATACGGCAACGGAAAGAGGATTGGGATGAGAAAGACTCTGGTTTTCTACAAAGGACGTGCCCCTCATGGCCAAAAATCTGATTGGATCATGCATGAGTATAGGCTTGAAGATAACAACACCAACACCGAGGCCAACATTGTGACGAATGTAATAGGAGATGCAGCACAGGAAGAAGGATGGGTGGTGTGCAGGATATTCAAGAAGAAGAACCATCTCAAAACCCTAGAGAGCCCCCTGGCTTCGTCCATTACAGAGGAAACAATCAGAAGCCACCAGCCCGACTCCATGTTCGAAGGTGATGATGACGACGAGGGAGCTCTAGAGCAGATCTTCGAGCAAATGGGAAGAAGCTGTTGCAAAGAAGAAGAACAAAACGACCCCACCACCACCAACAACAACAACCGAAGAATCATCAGACCGTTTGACGACACTGTCATGAACAACAACAACAACAACAACTTTAGCCATGGCTACTTCCACCATGACAGGTTCTTGAAGCTTCCTCGCTTAGAAAGCCCAAGATCCAATAATTATGGGTACCACCCGATCATTGAAGGGGCACATGGCGGCGGCAGCGAGCACAGCTTTGTTCATCATCAAACGGAATCGGCAACTTCATCTGCTAATGGTGGTCTTATCACCAACTGGGCAGCACTGGATAGGCTCGTGGCTTCGCAGCTTAATGGCCAAACGGAGACTTCTCGGAGCCTAGCTGGCTTCAATACCACCGGTGACCCCCCCATGGGCTACGGCTTGAGCGACCATGATCTGCAACTGCCGACCCTGCGATCTTCTTCGTCACTTTCATCAATAATATCATCATCAGCCCACAACGGCGGAGCTAATTACGATTACACCAGCGAGATTGACCTCTGGAACTTTGCCCGATCCTCATCATCGTTAGTGTCAGGCTCGGAACCACTATGCCACGTGTCCAACACATCATCAGTGTAG 1278 0.5039 MQENMSISVNGQSQVPPGFRFHPTEEELLQYYLRKKVCYEKIDLDVIRDVDLNKLEPWDIQEKCKIGTTPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKVIYGNGKRIGMRKTLVFYKGRAPHGQKSDWIMHEYRLEDNNTNTEANIVTNVIGDAAQEEGWVVCRIFKKKNHLKTLESPLASSITEETIRSHQPDSMFEGDDDDEGALEQIFEQMGRSCCKEEEQNDPTTTNNNNRRIIRPFDDTVMNNNNNNNFSHGYFHHDRFLKLPRLESPRSNNYGYHPIIEGAHGGGSEHSFVHHQTESATSSANGGLITNWAALDRLVASQLNGQTETSRSLAGFNTTGDPPMGYGLSDHDLQLPTLRSSSSLSSIISSSAHNGGANYDYTSEIDLWNFARSSSSLVSGSEPLCHVSNTSSV 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5697g00002 425 Gene3D NAC domain 24 182 IPR036093 GO:0003677|GO:0006355
Pral5697g00002 425 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 254 - -
Pral5697g00002 425 Pfam No apical meristem (NAM) protein 16 143 IPR003441 GO:0003677|GO:0006355
Pral5697g00002 425 ProSiteProfiles NAC domain profile. 15 176 IPR003441 GO:0003677|GO:0006355
Pral5697g00002 425 FunFam NAC domain-containing protein 24 180 - -
Pral5697g00002 425 SUPERFAMILY NAC domain 9 176 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5697g00002 Pral-Chr5697 31548 33849 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5697g00002 1 423 NAC Transcription Factor Family AT2G46770 54.167 4.04e-139 400
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral5697g00002 NAM 7.3e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5697g00002 - - ahf:112734309 521.546