Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5695g00010 ATGGAAACTCTGTACCCATCTTCTTTTATGCCAAATTCAGACTGGCACGTTCAAGATAGCCTGGGCAACACAGAATGGACGAGAGAGGAGAACAAGAGGTTCGAGAGTGCCCTTGCCATACACGATAAGGACACCCCAGATAGGTGGCTGAAGGTGGCAGCCATGATCCCGGGTAAAACTGTGTACGATGTGATCAAGCAGTACAGAGAACTGGAAGAAGACATAGGCGAAATCGAAGCGGGTCGGGTTCCAATACCCGGGTATCTACCGTCTCCTTTCACCTTTGAGTTGGTTGACCACCAGAATTATGATGCATACAGAAAGAGGCCCGTCGCCTTCAAGGCTTCTGATCATGAGAGAAAGAAAGGGGTGCCTTGGACTGAAGAAGAACACAGGCGTTTCCTGATGGGGCTTCTGAAGTACGGGAAAGGAGATTGGAGGAATATCTCAAGGAATTTCGTGGTGACAAAGACACCAACCCAAGTGGCTAGTCATGCCCAGAAATACTACATAAGACAGAAGCTTTCTTCTGGAGGGAACAACAAAAGAAGACCAAGCATACACGACATAACCATTGTTAATCTCACAGAATCTACCACCCCACAAGACAACAAGCCTGTTCAATTCAATGACCAGTCTCCTATGTTCTCACCACATCAGAAGCCAAATAATGATGAGGTTTTCAACCCTAATTGCGACGGTTTCTTGCATTCATCTTCATCTGATATTGACTGTGTCCTTCATGAGGCTTTTGGTTATGCCAACCTCAAAAGCCAGGGTTTTAGGGCAAATTCTGGGGACTTCGGTAACCCAGCTGTGTTAGGCATCCATGCATTGTAA 840 0.4655 METLYPSSFMPNSDWHVQDSLGNTEWTREENKRFESALAIHDKDTPDRWLKVAAMIPGKTVYDVIKQYRELEEDIGEIEAGRVPIPGYLPSPFTFELVDHQNYDAYRKRPVAFKASDHERKKGVPWTEEEHRRFLMGLLKYGKGDWRNISRNFVVTKTPTQVASHAQKYYIRQKLSSGGNNKRRPSIHDITIVNLTESTTPQDNKPVQFNDQSPMFSPHQKPNNDEVFNPNCDGFLHSSSSDIDCVLHEAFGYANLKSQGFRANSGDFGNPAVLGIHAL 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5695g00010 279 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 118 174 IPR017930 -
Pral5695g00010 279 FunFam Transcription factor SRM1 18 85 - -
Pral5695g00010 279 ProSiteProfiles Myb-like domain profile. 118 170 IPR001005 -
Pral5695g00010 279 FunFam transcription factor MYB1R1 124 175 - -
Pral5695g00010 279 ProSiteProfiles SANT domain profile. 126 174 IPR017884 -
Pral5695g00010 279 NCBIfam myb-like DNA-binding domain, SHAQKYF class 121 173 IPR006447 GO:0003677
Pral5695g00010 279 SUPERFAMILY Homeodomain-like 120 174 IPR009057 -
Pral5695g00010 279 CDD SANT 25 71 IPR001005 -
Pral5695g00010 279 SUPERFAMILY Homeodomain-like 24 75 IPR009057 -
Pral5695g00010 279 Gene3D - 124 175 - -
Pral5695g00010 279 CDD SANT 125 169 IPR001005 -
Pral5695g00010 279 Pfam Myb-like DNA-binding domain 125 169 IPR001005 -
Pral5695g00010 279 Pfam Myb-like DNA-binding domain 25 70 IPR001005 -
Pral5695g00010 279 SMART sant 22 74 IPR001005 -
Pral5695g00010 279 SMART sant 122 172 IPR001005 -
Pral5695g00010 279 ProSiteProfiles SANT domain profile. 21 76 IPR017884 -
Pral5695g00010 279 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 19 227 IPR043363 -
Pral5695g00010 279 ProSiteProfiles Myb-like domain profile. 18 72 IPR001005 -
Pral5695g00010 279 Gene3D - 20 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5695g00010 Pral-Chr5695 36317 38145 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pral5695g00010 Myb_DNA-binding 1.1e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5695g00010 - - gmx:778039 382.104