Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5694g00015 ATGGTGGTCACAGAGAAGTCTCATGTTGTTGATATAGACAATGGTCGTCGGCGTAGCAGCTCTGTCGGTGGCGGTGGCGATGGAGGGCATCCAGACACAGCCGACAGCGTAGATAAGGAGCTAAAATCCTCCCATGAGGCATCTGGTGCCGAGATTGTGGGAGTGTTAGAAAAAGAGAAGGGATCCCCCGCATCGGAGTGTTCGGTGGAGGTAGATTTGGGGAATGTGGTGACTGAAACTAAGGCACATTTGGGTGAGGTGAAGAGGGATTGTAGGATTTGCCATCTTAGTATGGATATGACCGATCATGAATCTGGGAGCATTGAGCTCGGATGTTCTTGCAAGGACGATTTGGTTGCTGCTCACAAGCAATGTGCTGAGGCTTGGTTCAAGATCAAGGGAAACAAAACCTGTGAAATCTGTGGATCAATTGCACGCAATGTAACTGGAGCTTTTGAAGTTGAAACAATTGAACAGTGGAGCGAGTCAAATGATGCCACCTTGGCAGCCCCAAGTGGAGCTGCGTCCCATGCTGATAATCGAAGTTTCTGGAGGGGCCACAGATTCTTGAATTTCCTACTAGCTTGCATGGTCTTTGCCTTTGTCATATCTTGGCTTTTCCACTTCAATGTACCTTCTTAA 642 0.4813 MVVTEKSHVVDIDNGRRRSSSVGGGGDGGHPDTADSVDKELKSSHEASGAEIVGVLEKEKGSPASECSVEVDLGNVVTETKAHLGEVKRDCRICHLSMDMTDHESGSIELGCSCKDDLVAAHKQCAEAWFKIKGNKTCEICGSIARNVTGAFEVETIEQWSESNDATLAAPSGAASHADNRSFWRGHRFLNFLLACMVFAFVISWLFHFNVPS 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5694g00015 213 Pfam RING-variant domain 91 141 IPR011016 GO:0008270
Pral5694g00015 213 ProSiteProfiles Zinc finger RING-CH-type profile. 83 148 IPR011016 GO:0008270
Pral5694g00015 213 SUPERFAMILY RING/U-box 88 144 - -
Pral5694g00015 213 SMART ringv_2 90 142 IPR011016 GO:0008270
Pral5694g00015 213 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 76 150 IPR013083 -
Pral5694g00015 213 PANTHER ZINC FINGER, RING-CH-TYPE 23 212 - -
Pral5694g00015 213 MobiDBLite consensus disorder prediction 1 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5694g00015 Pral-Chr5694 128855 131857 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5694g00015 19 213 C3H Transcription Factor Family AT5G05830 56.345 3.39e-67 203
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5694g00015 - - gmx:100818979 282.337