Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5692g00001 ATGAATGTTGAACCCCAGAATTCTGAAGCAGAGAGCAGCTCAAACTCATTCTCCTCGCCGCCAACTTCACCATCATCACCCCCTTCAAGCAGGGCTCTTAAAAAATCAGTCTCACAGGGTGAGTCTCAGGGCCCAGAATCAAAAAAGATAAAACGCATTCGAGACTCCAATAAACATCCTGTGTATCGTGGGGTCCGTATGCGTAGCTGGGGCAAATGGGTTTCTGAAATTCGCGAGCCACGCAAAAAATCTCGCATATGGCTGGGTACATTCTCAACCCCTGAAATGGCCGCAAGGGCACACGACGTCGCTGCTCTGAGCATCAAAGGGAACTCCGCCATTCTCAATTTCCCTGAACTAGCAAGCTCGCTGCCCCGCCCCGCCTCTGTCTCTCCGCGCGATATTCAGGCAGCCGCAGCAAAAGCCGCTCAAATGGATCAGTTTGACTCGCCATCGTCATCGTCCGCCTCGTTATTGTCATCTTCATCTTCCATGACCTCGTTGGTTTCGGCAAGGGAAATGTGCAGTGGTTCGGAGGAATTGAGCGAGATCATAGAGTTGCCGAGCTTGGAAACAAGTGAGGAGACGCGTGAGTTTAGGAATGAGTTTGTGTTCATGGACTCTTTATCGGATGGGTGGATGGATCAATCACCATGGTTACAGAGCATGGAAGATTGTGACGGGTACATCGCTGATCAGCTAGCAGTGCCAGCAGAGAGTGGAATCATAAATAACCTCGATAGTTTGCTCTGGAATTACTGA 762 0.5013 MNVEPQNSEAESSSNSFSSPPTSPSSPPSSRALKKSVSQGESQGPESKKIKRIRDSNKHPVYRGVRMRSWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDVAALSIKGNSAILNFPELASSLPRPASVSPRDIQAAAAKAAQMDQFDSPSSSSASLLSSSSSMTSLVSAREMCSGSEELSEIIELPSLETSEETREFRNEFVFMDSLSDGWMDQSPWLQSMEDCDGYIADQLAVPAESGIINNLDSLLWNY 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5692g00001 253 MobiDBLite consensus disorder prediction 1 20 - -
Pral5692g00001 253 SUPERFAMILY DNA-binding domain 61 119 IPR016177 GO:0003677
Pral5692g00001 253 CDD AP2 62 120 IPR001471 GO:0003700|GO:0006355
Pral5692g00001 253 MobiDBLite consensus disorder prediction 45 60 - -
Pral5692g00001 253 FunFam Ethylene-responsive transcription factor 2 60 119 - -
Pral5692g00001 253 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 28 197 - -
Pral5692g00001 253 Gene3D AP2/ERF domain 61 119 IPR036955 GO:0003700|GO:0006355
Pral5692g00001 253 SMART rav1_2 61 124 IPR001471 GO:0003700|GO:0006355
Pral5692g00001 253 MobiDBLite consensus disorder prediction 1 60 - -
Pral5692g00001 253 MobiDBLite consensus disorder prediction 28 44 - -
Pral5692g00001 253 Pfam AP2 domain 60 110 IPR001471 GO:0003700|GO:0006355
Pral5692g00001 253 PRINTS Ethylene responsive element binding protein signature 62 73 IPR001471 GO:0003700|GO:0006355
Pral5692g00001 253 PRINTS Ethylene responsive element binding protein signature 84 100 IPR001471 GO:0003700|GO:0006355
Pral5692g00001 253 ProSiteProfiles AP2/ERF domain profile. 61 118 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5692g00001 Pral-Chr5692 6479 8103 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5692g00001 48 229 AP2-EREBP Transcription Factor Family AT5G11590 64.171 2.17e-66 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pral5692g00001 AP2 8.6e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5692g00001 K09286 - qsa:O6P43_015497 275.404