Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5691g00004 ATGGAACCGGCGTGCTTTGACTGTAATGGGGGTGTCTCAAGGAGGAAAAATTTGAAATCAATTTCTTCACAGACTAGCACAGCTGATAGTGACCATGGTTGCTTTGAGTGCAACATATGTTTGGAGTCAGCTCATGATCCTGTGGTCACTCTGTGCGGTCACTTGTACTGCTGGCCTTGCATATTCAAGTGGCTTCAAGTTCAGGACTCTTCCGATGAATCAGACCAGCTGCAACCTACATGCCCAGTTTGTAAAGCCGATCTCTCTCATACTTCATTAGTCCCTCTTTATGGCAGAGGTGCGCATAGTTCGGATTCTGAGCCCAAGAAAACCCAGATGGATATAGGAATACCTCGTAGACCGCCTCCTCACACATCGAATGCTACCTTAAATTCTCCAAGTGCATCTACTTCTCAACTGGGTCAACTCCCAAGCTACTTCCAGTCGCAAACGCAGCAATACTTGCCTCACCTTTATGGAGGATATGCTATTAATAGAACACCATATCTTGGTGTTGCAGCCCTGACTAGTCTCTCCTATCCTATTATTGATATGTTCAGGGAAACGGTCTTTGCAGGGATCTTTGGGAGTTCCGGTTCTAATTCATTGGCGCATCGTTATGCCCGTTACTACCCTCATATTAGGAGTGACAGTCATAGAATGAGAAGGCAGGAAATGCTCATTGACAAGTCTCTGAGCAGAGTATCTTTCTTTCTCCTCTGTTGTGTCATTCTGTGTCTTCTCTTGTTTTGA 753 0.4529 MEPACFDCNGGVSRRKNLKSISSQTSTADSDHGCFECNICLESAHDPVVTLCGHLYCWPCIFKWLQVQDSSDESDQLQPTCPVCKADLSHTSLVPLYGRGAHSSDSEPKKTQMDIGIPRRPPPHTSNATLNSPSASTSQLGQLPSYFQSQTQQYLPHLYGGYAINRTPYLGVAALTSLSYPIIDMFRETVFAGIFGSSGSNSLAHRYARYYPHIRSDSHRMRRQEMLIDKSLSRVSFFLLCCVILCLLLF 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5691g00004 250 Pfam RING-type zinc-finger 37 82 IPR027370 -
Pral5691g00004 250 ProSitePatterns Zinc finger RING-type signature. 52 61 IPR017907 -
Pral5691g00004 250 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 8 98 IPR013083 -
Pral5691g00004 250 SUPERFAMILY RING/U-box 32 97 - -
Pral5691g00004 250 MobiDBLite consensus disorder prediction 124 140 - -
Pral5691g00004 250 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATED 20 247 IPR045103 GO:0005783|GO:0006511|GO:0061630
Pral5691g00004 250 SMART ring_2 37 84 IPR001841 -
Pral5691g00004 250 MobiDBLite consensus disorder prediction 98 140 - -
Pral5691g00004 250 ProSiteProfiles Zinc finger RING-type profile. 37 85 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5691g00004 Pral-Chr5691 8314 10751 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5691g00004 9 236 C3H Transcription Factor Family AT4G27470 43.515 5.81e-50 162