Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5691g00001 ATGAAAATGGAACCGGCGTGCTTTGACTGTAATGGGGGTGTCTCAAGGAGGAAAAATTTGAAATCAATTTCTTCACAGACTAGCACAGCTGATAGTGACCATGGTTGCTTTGAGTGCAACATATGTTTGGAGTCAGCTCATGATCCTGTGGTCACTCTGTGCGGTCACTTGTACTGCTGGCCTTGCATATTCAAGTGGCTTCAAGTTCAGGACTCTTCCGATGAATCAGACCAGCTGCAACCTACATGCCCAGTTTGTAAAGCCGATCTCTCTCATACTTCATTAGTCCCTCTTTATGGCAGAGGTGCGCATAGTTCGGATTCTGAGCCCAAGAAAACCCAGATGGATATAGGAATACCTCGTAGACCGCCTCCTCACACATCGAATGCTACCTTAAATTCTCCAAGTGCATCTACTTCTCAACTGGGTCAACTCCCAAGCTACTTCCAGTCGCAAACGCAGCAATACTTGCCTCACCTTTATGGAGGATATGCTATTAATAGAACACCATATCTTGGTGTTGCAGCCCTGACTAGTCTCTCCTATCCTATTATTGATATGTTCAGGGAAACGGTCTTTGCAGGGATCTTTGGGAGTTCCGGTTCTAATTCATTGGCGCATCGTTATGCCCGTTACTACCCTCATATTAGGAGTGACAGTCATAGAATGAGAAGGCAGGAAATGCTCATTGACAAGTCTCTGAGCAGAGTATCTTTCTTTCTCCTCTGTTGTGTCATTCTGTGTCTTCTCTTGTTTTGA 759 0.4506 MKMEPACFDCNGGVSRRKNLKSISSQTSTADSDHGCFECNICLESAHDPVVTLCGHLYCWPCIFKWLQVQDSSDESDQLQPTCPVCKADLSHTSLVPLYGRGAHSSDSEPKKTQMDIGIPRRPPPHTSNATLNSPSASTSQLGQLPSYFQSQTQQYLPHLYGGYAINRTPYLGVAALTSLSYPIIDMFRETVFAGIFGSSGSNSLAHRYARYYPHIRSDSHRMRRQEMLIDKSLSRVSFFLLCCVILCLLLF 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5691g00001 252 ProSiteProfiles Zinc finger RING-type profile. 39 87 IPR001841 -
Pral5691g00001 252 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 8 100 IPR013083 -
Pral5691g00001 252 Pfam RING-type zinc-finger 39 84 IPR027370 -
Pral5691g00001 252 SUPERFAMILY RING/U-box 34 99 - -
Pral5691g00001 252 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATED 21 249 IPR045103 GO:0005783|GO:0006511|GO:0061630
Pral5691g00001 252 SMART ring_2 39 86 IPR001841 -
Pral5691g00001 252 MobiDBLite consensus disorder prediction 126 142 - -
Pral5691g00001 252 ProSitePatterns Zinc finger RING-type signature. 54 63 IPR017907 -
Pral5691g00001 252 MobiDBLite consensus disorder prediction 100 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5691g00001 Pral-Chr5691 1126 10751 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5691g00001 11 238 C3H Transcription Factor Family AT4G27470 43.515 6.34e-50 162